Antimicrobial resistance and genomic insights into bovine mastitis-associated Staphylococcus aureus in Australia

被引:14
作者
O'Dea, Mark [1 ]
Abraham, Rebecca J. [1 ]
Sahibzada, Shafi [1 ]
Lee, Terence [1 ]
Jordan, David [1 ,2 ]
Laird, Tanya [1 ]
Pang, Stanley [1 ]
Buller, Nicky [3 ]
Stegger, Marc [1 ,4 ]
Coombs, Geoffrey W. [1 ]
Trott, Darren J. [5 ]
Abraham, Sam [1 ]
机构
[1] Murdoch Univ, Coll Sci Hlth Engn & Educ, Antimicrobial Resistance & Infect Dis Lab, Murdoch, WA, Australia
[2] NSW Dept Primary Ind, Wollongbar, NSW, Australia
[3] Dept Primary Ind & Reg Dev, S Perth, WA, Australia
[4] Statens Serum Inst, Dept Bacteria Parasites & Fungi, Copenhagen, Denmark
[5] Univ Adelaide, Sch Anim & Vet Sci, Roseworthy, SA, Australia
基金
澳大利亚研究理事会;
关键词
Mastitis; Staphylococcus aureus; Dairy; Antimicrobial resistance; Whole genome sequencing; Bovine; Human; Sequence types; Clonal complexes; ST97; ST352; BULK TANK MILK; ANTIBIOTIC-RESISTANCE; POLYSACCHARIDE; HOST; MRSA; SUSCEPTIBILITY; TRANSMISSION; INFECTIONS; PREVALENCE; BACTERIA;
D O I
10.1016/j.vetmic.2020.108850
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The aim of this study was to investigate antimicrobial resistance and population structure of bovine mastitis-associated Staphylococcus aureus isolates, and compare them to human isolates obtained from Western Australian hospitals and overseas strains to determine relatedness to human isolates from a zoonotic or reverse zoonotic aspect. Antimicrobial susceptibility testing was performed on 202 S. aureus isolates of which 166 isolates underwent whole genome sequencing. Only resistance to penicillin (12.4%) and erythromycin (0.5%) was identified and of note, no resistance was demonstrated to oxacillin. Genomic characterisation identified 14 multilocus sequence types (STs), with most isolates belonging to clonal complexes 97, 705, and 1. Four distinct clades based on virulence gene composition were identified. The four clades were predominantly ST based, consisting of ST352, ST97, ST81/ST1, and ST705. Core genome comparison of the bovine and human S. aureus isolates demonstrated defined clustering by ST, with the Australian bovine S. aureus isolates clustering together according to their ST separately from human isolates. In addition, a bovine specific cluster comprising Australian ST151 and ST705 isolates, and ST151 isolates from Irish dairy cattle was clearly delineated. Examination of a detailed ST352 phylogeny provided evidence for geographical clustering of Australian strains into a distinct grouping separate from international strains. This study has identified Australian S. aureus isolates have limited genetic diversity and are genetically distinct from human and international bovine S. aureus isolates. Current first line therapies for bovine mastitis in Australian dairy cattle remain appropriate.
引用
收藏
页数:8
相关论文
共 52 条
[1]   Escherichia coli and Salmonella spp. isolated from Australian meat chickens remain susceptible to critically important antimicrobial agents [J].
Abraham, Sam ;
O'Dea, Mark ;
Sahibzada, Shafi ;
Hewson, Kylie ;
Pavic, Anthony ;
Veltman, Tania ;
Abraham, Rebecca ;
Harris, Taha ;
Trott, Darren J. ;
Jordan, David .
PLOS ONE, 2019, 14 (10)
[2]   Reverse zoonotic transmission of community-associated MRSA ST1-IV to a dairy cow [J].
Abraham, Sam ;
Jagoe, Stephen ;
Pang, Stanley ;
Coombs, GeoffreyW. ;
O'Dea, Mark ;
Kelly, Jonathon ;
Khazandi, Manouchehr ;
Petrovski, Kiro R. ;
Trott, Darren J. .
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 2017, 50 (01) :125-126
[3]   First detection of extended-spectrum cephalosporin- and fluoroquinolone-resistant Escherichia coli in Australian food-producing animals [J].
Abraham, Sam ;
Jordan, David ;
Wong, Hui S. ;
Johnson, James R. ;
Toleman, Mark A. ;
Wakeham, David L. ;
Gordon, David M. ;
Turnidge, John D. ;
Mollinger, Joanne L. ;
Gibson, Justine S. ;
Trott, Darren J. .
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE, 2015, 3 (04) :273-277
[4]   Salmonella enterica isolated from infections in Australian livestock remain susceptible to critical antimicrobials [J].
Abraham, Sam ;
Groves, Mitchell D. ;
Trott, Darren J. ;
Chapman, Toni A. ;
Turner, Bernadette ;
Hornitzky, Michael ;
Jordan, David .
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 2014, 43 (02) :126-130
[5]  
[Anonymous], 2018, Performance Standards For Antimicrobial Susceptibility Testing, V28th
[6]   SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].
Bankevich, Anton ;
Nurk, Sergey ;
Antipov, Dmitry ;
Gurevich, Alexey A. ;
Dvorkin, Mikhail ;
Kulikov, Alexander S. ;
Lesin, Valery M. ;
Nikolenko, Sergey I. ;
Son Pham ;
Prjibelski, Andrey D. ;
Pyshkin, Alexey V. ;
Sirotkin, Alexander V. ;
Vyahhi, Nikolay ;
Tesler, Glenn ;
Alekseyev, Max A. ;
Pevzner, Pavel A. .
JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477
[7]   Genotypic and phenotypic characterization of methicillin-resistant Staphylococcus aureus (MRSA) isolated from milk of bovine mastitis [J].
Bardiau, M. ;
Yamazaki, K. ;
Duprez, J-N ;
Taminiau, B. ;
Mainil, J. G. ;
Ote, I. .
LETTERS IN APPLIED MICROBIOLOGY, 2013, 57 (03) :181-186
[8]   Functional basis for complement evasion by staphylococcal superantigen-like 7 [J].
Bestebroer, Jovanka ;
Aerts, Piet C. ;
Rooijakkers, Suzan H. M. ;
Pandey, Manoj K. ;
Koehl, Joerg ;
van Strijp, Jos A. G. ;
de Haas, Carla J. C. .
CELLULAR MICROBIOLOGY, 2010, 12 (10) :1506-1516
[9]   Bovine mastitis: An evolving disease [J].
Bradley, AJ .
VETERINARY JOURNAL, 2002, 164 (02) :116-128
[10]   The Giant Protein Ebh Is a Determinant of Staphylococcus aureus Cell Size and Complement Resistance [J].
Cheng, Alice G. ;
Missiakas, Dominique ;
Schneewind, Olaf .
JOURNAL OF BACTERIOLOGY, 2014, 196 (05) :971-981