Graph- and finite element-based total variation models for the inverse problem in diffuse optical tomography

被引:29
作者
Lu, Wenqi [1 ]
Duan, Jinming [1 ]
Orive-Miguel, David [2 ,3 ]
Herve, Lionel [2 ]
Styles, Iain B. [1 ]
机构
[1] Univ Birmingham, Sch Comp Sci, Birmingham, W Midlands, England
[2] CEA, LETI, MINATEC Campus, F-38054 Grenoble, France
[3] Univ Grenoble Alpes, GIPSA Lab, Grenoble INP, CNRS, F-38000 Grenoble, France
基金
欧盟地平线“2020”;
关键词
TOTAL VARIATION REGULARIZATION; IMAGE-RECONSTRUCTION; SPATIAL-RESOLUTION; BRAIN-FUNCTION; CLASSIFICATION; MINIMIZATION; ALGORITHM; BREAST;
D O I
10.1364/BOE.10.002684
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Total variation (TV) is a powerful regularization method that has been widely applied in different imaging applications, but is difficult to apply to diffuse optical tomography (DOT) image reconstruction (inverse problem) due to unstructured discretization of complex geometries, non-linearity of the data fitting and regularization terms, and non-differentiability of the regularization term. We develop several approaches to overcome these difficulties by: i) defining discrete differential operators for TV regularization using both finite element and graph representations; ii) developing an optimization algorithm based on the alternating direction method of multipliers (ADMM) for the non-differentiable and non-linear minimization problem; iii) investigating isotropic and anisotropic variants of TV regularization, and comparing their finite element (FEM)- and graph-based implementations. These approaches are evaluated on experiments on simulated data and real data acquired from a tissue phantom. Our results show that both FEM and graph-based TV regularization is able to accurately reconstruct both sparse and non-sparse distributions without the over-smoothing effect of Tikhonov regularization and the over-sparsifying effect of L-1 regularization. The graph representation was found to out-perform the FEM method for low-resolution meshes, and the FEM method was found to be more accurate for high-resolution meshes. (C) 2019 Optical Society of America under the terms of the OSA Open Access Publishing Agreement
引用
收藏
页码:2684 / 2707
页数:24
相关论文
共 52 条
[1]  
[Anonymous], 2014, A field guide to forward-backward splitting with a FASTA implementation
[2]   Optical imaging in medicine .2. Modelling and reconstruction [J].
Arridge, SR ;
Hebden, JC .
PHYSICS IN MEDICINE AND BIOLOGY, 1997, 42 (05) :841-853
[3]   PHOTON-MEASUREMENT DENSITY-FUNCTIONS .2. FINITE-ELEMENT-METHOD CALCULATIONS [J].
ARRIDGE, SR ;
SCHWEIGER, M .
APPLIED OPTICS, 1995, 34 (34) :8026-8037
[4]  
Ashburner J., 2003, Human brain function, V2
[5]   Sparsity-Driven Reconstruction for FDOT With Anatomical Priors [J].
Baritaux, Jean-Charles ;
Hassler, Kai ;
Bucher, Martina ;
Sanyal, Sebanti ;
Unser, Michael .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2011, 30 (05) :1143-1153
[6]   A Fast Iterative Shrinkage-Thresholding Algorithm for Linear Inverse Problems [J].
Beck, Amir ;
Teboulle, Marc .
SIAM JOURNAL ON IMAGING SCIENCES, 2009, 2 (01) :183-202
[7]   DIFFUSE INTERFACE MODELS ON GRAPHS FOR CLASSIFICATION OF HIGH DIMENSIONAL DATA [J].
Bertozzi, Andrea L. ;
Flenner, Arjuna .
MULTISCALE MODELING & SIMULATION, 2012, 10 (03) :1090-1118
[8]   Improving the diffuse optical imaging spatial resolution of the cerebral hemodynamic response to brain activation in humans [J].
Boas, DA ;
Chen, K ;
Grebert, D ;
Franceschini, MA .
OPTICS LETTERS, 2004, 29 (13) :1506-1508
[9]   Multi-class Transductive Learning Based on a"" 1 Relaxations of Cheeger Cut and Mumford-Shah-Potts Model [J].
Bresson, Xavier ;
Tai, Xue-Cheng ;
Chan, Tony F. ;
Szlam, Arthur .
JOURNAL OF MATHEMATICAL IMAGING AND VISION, 2014, 49 (01) :191-201
[10]   Comparison of Neurological NIRS signals during standing Valsalva maneuvers, pre and post vasopressor injection [J].
Clancy, Michael ;
Belli, Antonio ;
Davies, David ;
Lucas, Samuel J. E. ;
Su, Zhangjie ;
Dehghani, Hamid .
DIFFUSE OPTICAL IMAGING V, 2015, 9538