Molecular karyotyping in 17 patients and mutation screening in 41 patients with Kabuki syndrome

被引:30
|
作者
Kuniba, Hideo [1 ,2 ,15 ]
Yoshiura, Koh-ichiro [1 ,15 ]
Kondoh, Tatsuro [2 ]
Ohashi, Hirofumi [3 ,15 ]
Kurosawa, Kenji [4 ]
Tonoki, Hidefumi [5 ]
Nagai, Toshiro [6 ,15 ]
Okamoto, Nobuhiko [7 ,8 ]
Kato, Mitsuhiro [9 ]
Fukushima, Yoshimitsu [10 ,15 ]
Kaname, Tadashi [15 ]
Naritomi, Kenji [15 ]
Matsumoto, Tadashi [2 ,11 ]
Moriuchi, Hiroyuki [2 ,11 ]
Kishino, Tatsuya [12 ,15 ]
Kinoshita, Akira [1 ,15 ]
Miyake, Noriko [13 ,15 ]
Matsumoto, Naomichi [13 ,15 ]
Niikawa, Norio [1 ,14 ,15 ]
机构
[1] Nagasaki Univ, Grad Sch Biomed Sci, Dept Human Genet, Nagasaki 8528523, Japan
[2] Nagasaki Univ, Sch Med, Dept Pediat, Nagasaki 8528523, Japan
[3] Saitama Childrens Med Ctr, Div Med Genet, Iwatsuki, Saitama, Japan
[4] Kanagawa Childrens Med Ctr, Div Med Genet, Yokohama, Kanagawa, Japan
[5] Tenshi Hosp, Dept Pediat, Sapporo, Hokkaido, Japan
[6] Dokkyo Univ, Sch Med, Koshigaya Hosp, Dept Pediat, Koshigaya, Japan
[7] Osaka Med Ctr, Dept Planning & Res, Osaka, Japan
[8] Res Inst Maternal & Child Hlth, Osaka, Japan
[9] Yamagata Univ, Sch Med, Dept Pediat, Yamagata 99023, Japan
[10] Shinshu Univ, Sch Med, Dept Med Genet, Matsumoto, Nagano 390, Japan
[11] Univ Ryukyus, Dept Med Genet, Nishihara, Okinawa 90301, Japan
[12] Nagasaki Univ, Div Funct Genom, Ctr Frontier Life Sci, Nagasaki 852, Japan
[13] Yokohama City Univ, Grad Sch Med, Dept Human Genet, Yokohama, Kanagawa 232, Japan
[14] Hlth Sci Univ Hokkaido, Res Inst Personalized Hlth Sci, Tobetsu, Japan
[15] Japan Sci & Technol Agcy, Tokyo, Japan
基金
日本科学技术振兴机构;
关键词
Kabuki syndrome; microdeletion; molecular karyotyping; mutation screening; Niikawa-Kuroki syndrome; MAKE-UP-SYNDROME; NIIKAWA-KUROKI SYNDROME; ARRAY-CGH; MENTAL-RETARDATION; DUPLICATION; ASSOCIATION; ABERRATIONS; 8P22-P23.1; DELETIONS; C20ORF133;
D O I
10.1038/jhg.2009.30
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The Kabuki syndrome (KS, OMIM 147920), also known as the Niikawa-Kuroki syndrome, is a multiple congenital anomaly/mental retardation syndrome characterized by a distinct facial appearance. The cause of KS has been unidentified, even by whole-genome scan with array comparative genomic hybridization (CGH). In recent years, high-resolution oligonucleotide array technologies have enabled us to detect fine copy number alterations. In 17 patients with KS, molecular karyotyping was carried out with GeneChip 250K NspI array (Affymetrix) and Copy Number Analyser for GeneChip (CNAG). It showed seven copy number alterations, three deleted regions and four duplicated regions among the patients, with the exception of registered copy number variants (CNVs). Among the seven loci, only the region of 9q21.11-q21.12 (similar to 1.27 Mb) involved coding genes, namely, transient receptor potential cation channel, subfamily M, member 3 (TRPM3), Kruppel-like factor 9 (KLF9), structural maintenance of chromosomes protein 5 (SMC5) and MAM domain containing 2 (MAMDC2). Mutation screening for the genes detected 10 base substitutions consisting of seven single-nucleotide polymorphisms (SNPs) and three silent mutations in 41 patients with KS. Our study could not show the causative genes for KS, but the locus of 9q21.11-q21.12, in association with a cleft palate, may contribute to the manifestation of KS in the patient. As various platforms on oligonucleotide arrays have been developed, higher resolution platforms will need to be applied to search tiny genomic rearrangements in patients with KS. Journal of Human Genetics (2009) 54, 304-309; doi:10.1038/jhg.2009.30; published online 3 April 2009
引用
收藏
页码:304 / 309
页数:6
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