Analysis of RNA-Protein Interactions by Cell Mixing

被引:2
|
作者
Stubbs, Sarah H. [1 ]
Conrad, Nicholas K. [1 ]
机构
[1] Univ Texas SW Med Ctr Dallas, Dept Microbiol, Dallas, TX 75390 USA
关键词
D O I
10.1016/B978-0-12-420120-0.00005-0
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
RNA-protein complexes are critical for almost all aspects of gene expression. Analysis of RNA-protein interactions can be complicated by the disruption of native complexes and the formation of new, reassorted complexes upon cell lysis. Before concluding that a specific RNA and protein interact in vivo, cell-mixing experiments can be performed to ensure that observed RNA-protein complexes are not formed after lysis of cells.
引用
收藏
页码:67 / 80
页数:14
相关论文
共 50 条
  • [1] RNA-PROTEIN INTERACTIONS
    FRANKEL, AD
    MATTAJ, IW
    RIO, DC
    CELL, 1991, 67 (06) : 1041 - 1046
  • [2] RNA-protein interactions
    Hall, KB
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2002, 12 (03) : 283 - 288
  • [3] In-Cell Discovery of RNA-Protein Interactions
    Sabate-Cadenas, Xavier
    Shkumatava, Alena
    TRENDS IN BIOCHEMICAL SCIENCES, 2020, 45 (03) : 272 - 273
  • [4] RNA-PROTEIN INTERACTIONS
    WICKENS, MP
    DAHLBERG, JE
    CELL, 1987, 51 (03) : 339 - 342
  • [5] Analysis of RNA-protein interactions by flow cytometry
    Brodsky, AS
    Johnston, AP
    Trau, M
    Silver, PA
    CURRENT OPINION IN MOLECULAR THERAPEUTICS, 2003, 5 (03) : 235 - 240
  • [6] In-cell identification and measurement of RNA-protein interactions
    Graindorge, Antoine
    Pinheiro, Ines
    Nawrocka, Anna
    Mallory, Allison C.
    Tsvetkov, Peter
    Gil, Noa
    Carolis, Carlo
    Buchholz, Frank
    Ulitsky, Igor
    Heard, Edith
    Taipale, Mikko
    Shkumatava, Alena
    NATURE COMMUNICATIONS, 2019, 10 (1)
  • [7] 'Oming in on RNA-protein interactions
    Rinn, John L.
    Ule, Jernej
    GENOME BIOLOGY, 2014, 15 (01):
  • [8] RNA-protein interactions.
    Williamson, JR
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1997, 214 : 163 - PHYS
  • [9] RNA-protein interactions.
    Zhang, QS
    Wang, ED
    PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 1999, 26 (02) : 121 - 125
  • [10] In-cell identification and measurement of RNA-protein interactions
    Antoine Graindorge
    Inês Pinheiro
    Anna Nawrocka
    Allison C. Mallory
    Peter Tsvetkov
    Noa Gil
    Carlo Carolis
    Frank Buchholz
    Igor Ulitsky
    Edith Heard
    Mikko Taipale
    Alena Shkumatava
    Nature Communications, 10