Allele frequencies and diversity parameters of 27 single nucleotide polymorphisms within and across goat breeds

被引：17
作者：
Cappuccio, I.
Pariset, L.
Ajmone-Marsan, P.
Dunner, S.
Cortes, O.
Erhardt, G.
Luehken, G.
Gutscher, K.
Joost, S.
Nijman, I. J.
Lenstra, J. A.
England, P. R.
Zundel, S.
Obexer-Ruff, G.
Beja-Pereira, A.
Valentini, A.
机构：
[1] Univ Tuscia, Dipartimento Prod Anim, I-01100 Viterbo, Italy
[2] Univ Cattolica Sacro Cuore, Inst Zootecn, I-29100 Piacenza, Italy
[3] Univ Complutense, Dept Anim Prod, E-28040 Madrid, Spain
[4] Univ Giessen, Inst Tierzucht & Haustiergenet, D-35390 Giessen, Germany
[5] Ecole Polytech Fed Lausanne, CH-1015 Lausanne, Switzerland
[6] Univ Utrecht, Fac Vet Med, NL-3584 CL Utrecht, Netherlands
[7] Univ Grenoble 1, Lab Ecol Alpine, F-38041 Grenoble 09, France
[8] Univ Bern, Inst Genet, Fac Vet, CH-3001 Bern, Switzerland
[9] Univ Porto, CIBIO, P-4485661 Vairao, Portugal
来源：
MOLECULAR ECOLOGY NOTES | 2006年 / 6卷 / 04期
关键词：
gene diversity; goat; selection; single-nucleotide polymorphisms;
D O I：
10.1111/j.1471-8286.2006.01425.x
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
Single-nucleotide polymorphisms (SNPs) are useful markers for biodiversity assessment, linkage analysis, traceability and paternity testing. To date, there are no available SNPs for goat in the NCBI dbSNP database and only a few are reported in the literature. Within the European Union Econogene project, we characterized 27 SNPs in goats using a targeted-gene approach. Polymorphisms were identified in a panel of 16 unrelated individuals belonging to eight different goat breeds selected throughout Europe. Genotypes of 30 goats from each of the eight breeds were determined for all the SNPs characterized and diversity measures were estimated. The caprine SNPs described will be a useful complement to the available genome markers.
引用
收藏
页码：992 / 997
页数：6
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