From barcoding single individuals to metabarcoding biological communities: towards an integrative approach to the study of global biodiversity

被引:304
作者
Cristescu, Melania E. [1 ]
机构
[1] McGill Univ, Dept Biol, Montreal, PQ H3A 1B1, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
sequence biodiversity; DNA barcoding; metabarcoding; environmental DNA (eDNA); second-generation sequencing; taxonomy crisis; DNA; DIVERSITY; SEQUENCES; TAXONOMY; CHALLENGES; SCIENCE; PLANTS; GENES;
D O I
10.1016/j.tree.2014.08.001
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
DNA-based species identification, known as barcoding, transformed the traditional approach to the study of biodiversity science. The field is transitioning from barcoding individuals to metabarcoding communities. This revolution involves new sequencing technologies, bioinformatics pipelines, computational infrastructure, and experimental designs. In this dynamic genomics landscape, metabarcoding studies remain insular and biodiversity estimates depend on the particular methods used. In this opinion article, I discuss the need for a coordinated advancement of DNA-based species identification that integrates taxonomic and barcoding information. Such an approach would facilitate access to almost 3 centuries of taxonomic knowledge and 1 decade of building repository barcodes. Conservation projects are time sensitive, research funding is becoming restricted, and informed decisions depend on our ability to embrace integrative approaches to biodiversity science.
引用
收藏
页码:566 / 571
页数:6
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