Metagenomic analysis reveals mechanisms of atrazine biodegradation promoted by tree species

被引:36
作者
Aguiar, Luciana Monteiro [1 ]
Souza, Matheus de Freitas [2 ]
de Laia, Marcelo Luiz [3 ]
Melo, Janaina de Oliveira [4 ]
da Costa, Marcia Regina [1 ]
Goncalves, Janaina Fernandes [3 ]
Silva, Daniel Valadao [2 ]
dos Santos, Jose Barbosa [1 ]
机构
[1] Univ Fed Vales Jequitinhonha & Mucuri, Plant Prod Dept, Diamantina, MG, Brazil
[2] Univ Fed Rural Semi Arido, Dept Agr & Forestry Sci, Mossoro, RN, Brazil
[3] Univ Fed Vales Jequitinhonha & Mucuri, Dept Forest Engn, Diamantina, MG, Brazil
[4] Univ Fed Vales Jequitinhonha & Mucuri, Dept Basic Sci, Diamantina, MG, Brazil
关键词
Atrazine degradation genes; Microorganisms; New generation sequencing; AGRICULTURAL SOILS; WATER; PHYTOREMEDIATION; EFFICIENCY; NITRATE; IDENTIFICATION; REMEDIATION; SORPTION;
D O I
10.1016/j.envpol.2020.115636
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Metagenomics has provided the discovery of genes and metabolic pathways involved in the degradation of xenobiotics. Some microorganisms can metabolize these compounds, potentiating phytoremediation in association with plant. This study aimed to study the metagenome and the occurrence of atrazine degradation genes in rhizospheric soils of the phytoremediation species Inga striata and Caesalphinea ferrea. The genera of microorganisms predominant in the rhizospheric soils of I. striata and C. ferrea were Mycobacterium, Conexibacter, Bradyrhizobium, Solirubrobacter, Rhodoplanes, Streptomyces, Geothrix, Gaiella, Nitrospira, and Haliangium. The atzD, atzE, and atzF genes were detected in the rhizospheric soils of I. striata and atzE and atzF in the rhizospheric soils of C. ferrea. The rhizodegradation by both tree species accelerates the degradation of atrazine residues, eliminating toxic effects on plants highly sensitive to this herbicide. This is the first report for the species Agrobacterium rhizogenes and Candidatus Muproteobacteria bacterium and Micromonospora genera as atrazine degraders. (c) 2020 Elsevier Ltd. All rights reserved.
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页数:10
相关论文
共 86 条
[1]   Herbicide tolerance and water use efficiency in forest species used in degraded areas recovery programs [J].
Aguiar, Luciana Monteiro ;
dos Santos, Jose Barbosa ;
da Costa, Vitor Antunes ;
Brito, Lilian Almeida ;
Ferreira, Evander Alves ;
Pereira, Israel Marinho ;
Aspiazu, Ignacio .
BOSQUE, 2016, 37 (03) :493-500
[2]   Atrazine Contamination of Drinking Water and Adverse Birth Outcomes in Community Water Systems with Elevated Atrazine in Ohio, 2006-2008 [J].
Almberg, Kirsten S. ;
Turyk, Mary E. ;
Jones, Rachael M. ;
Rankin, Kristin ;
Freels, Sally ;
Stayner, Leslie T. .
INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 2018, 15 (09)
[3]   Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system [J].
Anantharaman, Karthik ;
Brown, Christopher T. ;
Hug, Laura A. ;
Sharon, Itai ;
Castelle, Cindy J. ;
Probst, Alexander J. ;
Thomas, Brian C. ;
Singh, Andrea ;
Wilkins, Michael J. ;
Karaoz, Ulas ;
Brodie, Eoin L. ;
Williams, Kenneth H. ;
Hubbard, Susan S. ;
Banfield, Jillian F. .
NATURE COMMUNICATIONS, 2016, 7
[4]  
[Anonymous], 2009, 816F09004 EPA
[5]  
Atangana A, 2014, TROPICAL AGROFORESTR, P343, DOI DOI 10.1007/978-94-007-7723-1_19
[6]   Effects of atrazine on photosynthesis and defense response and the underlying mechanisms in Phaeodactylum tricornutum [J].
Bai, Xiaocui ;
Sun, Chongchong ;
Xie, Jun ;
Song, Hao ;
Zhu, Qianqian ;
Su, Yiyuan ;
Qian, Haifeng ;
Fu, Zhengwei .
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2015, 22 (22) :17499-17507
[7]   Transport of 14C-prosulfocarb through soil columns under different amendment, herbicide incubation and irrigation regimes [J].
Barba, Victor ;
Marin-Benito, Jesus M. ;
Sanchez-Martin, Maria J. ;
Sonia Rodriguez-Cruz, M. .
SCIENCE OF THE TOTAL ENVIRONMENT, 2020, 701
[8]   Use of macrophytes to reduce the contamination of water resources by pesticides [J].
Barbalho Alencar, Brenda Thais ;
Vidal Ribeiro, Victor Hugo ;
Cabral, Cassia Michelle ;
Correa dos Santos, Naiane Maria ;
Ferreira, Evander Alves ;
Teodoro Francino, Dayana Maria ;
dos Santos, Jose Barbosa ;
Silva, Daniel Valadao ;
Souza, Matheus de Freitas .
ECOLOGICAL INDICATORS, 2020, 109
[9]   Metagenomics reveals that detoxification systems are underrepresented in marine bacterial communities [J].
Bengtsson-Palme, Johan ;
Rosenblad, Magnus Alm ;
Molin, Mikael ;
Blomberg, Anders .
BMC GENOMICS, 2014, 15
[10]  
Billet L., 2019, SCI REP, V9, P1