Transposable elements in brain health and disease

被引:25
作者
Ahmadi, Amirhossein [1 ]
De Toma, Ilario [2 ]
Vilor-Tejedor, Natalia [3 ,4 ,5 ]
Ghamsari, Mohammad Reza Eftekhariyan [6 ]
Sadeghi, Iman [7 ,8 ]
机构
[1] Persian Gulf Univ, Dept Biol, Fac Sci, Bushehr 75169, Iran
[2] Ctr Genom Regulat CRG, Syst Biol Program, Cellular & Syst Neurobiol, Barcelona, Spain
[3] Barcelona Inst Sci & Technol, Ctr Genom Regulat CRG, Dr Aiguader 88, Barcelona 08003, Spain
[4] Pasqual Maragall Fdn, BarcelonaBeta Brain Res Ctr BBRC, Barcelona, Spain
[5] Erasmus MC, Dept Clin Genet, Rotterdam, Netherlands
[6] Olivia Newton John Canc Res Inst, Melbourne, Vic, Australia
[7] CEINGE Biotecnol Avanzate, Naples, Italy
[8] Barcelona Inst Sci & Technol, CRG, Dr Aiguader 88, E-08003 Barcelona, Spain
关键词
Transposable elements; Brain development; Brain disorders; Retrotransposon; Neuroplasticity; HUMAN ENDOGENOUS RETROVIRUS; NON-LTR RETROTRANSPOSONS; MULTIPLE-SCLEROSIS; L1; RETROTRANSPOSITION; SOMATIC RETROTRANSPOSITION; DNA METHYLATION; LINE-1; ELEMENTS; TRANSCRIPTIONAL ACTIVITY; SVA RETROTRANSPOSONS; STRUCTURAL VARIATION;
D O I
10.1016/j.arr.2020.101153
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Transposable elements (TEs) occupy a large fraction of the human genome but only a small proportion of these elements are still active today. Recent works have suggested that TEs are expressed and active in the brain, challenging the dogma that neuronal genomes are static and revealing that they are susceptible to somatic genomic alterations. These new findings have major implications for understanding the neuroplasticity of the brain, which could hypothetically have a role in behavior and cognition, and contribute to vulnerability to disease. As active TEs could induce genetic diversity and mutagenesis, their influences on human brain development and diseases are of great interest. In this review, we will focus on the active TEs in the human genome and discuss in detail their impacts on human brain development. Furthermore, the association between TEs and brain-related diseases is discussed.
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页数:16
相关论文
共 225 条
[1]   Somatic retrotransposition is infrequent in glioblastomas [J].
Achanta, Pragathi ;
Steranka, Jared P. ;
Tang, Zuojian ;
Rodic, Nemanja ;
Sharma, Reema ;
Yang, Wan Rou ;
Ma, Sisi ;
Grivainis, Mark ;
Huang, Cheng Ran Lisa ;
Schneider, Anna M. ;
Gallia, Gary L. ;
Riggins, Gregory J. ;
Quinones-Hinojosa, Alfredo ;
Fenyo, David ;
Boeke, Jef D. ;
Burns, Kathleen H. .
MOBILE DNA, 2016, 7 :1-9
[2]   Pathophysiological Role of HERV-W in Schizophrenia [J].
Aftab, Awais ;
Shah, Asim A. ;
Hashmi, Ali Madeeh .
JOURNAL OF NEUROPSYCHIATRY AND CLINICAL NEUROSCIENCES, 2016, 28 (01) :17-25
[3]   Challenges to curing primary brain tumours [J].
Aldape, Kenneth ;
Brindle, Kevin M. ;
Chesler, Louis ;
Chopra, Rajesh ;
Gajjar, Amar ;
Gilbert, Mark R. ;
Gottardo, Nicholas ;
Gutmann, David H. ;
Hargrave, Darren ;
Holland, Eric C. ;
Jones, David T. W. ;
Joyce, Johanna A. ;
Kearns, Pamela ;
Kieran, Mark W. ;
Mellinghoff, Ingo K. ;
Merchant, Melinda ;
Pfister, Stefan M. ;
Pollard, Steven M. ;
Ramaswamy, Vijay ;
Rich, Jeremy N. ;
Robinson, Giles W. ;
Rowitch, David H. ;
Sampson, John H. ;
Taylor, Michael D. ;
Workman, Paul ;
Gilbertson, Richard J. .
NATURE REVIEWS CLINICAL ONCOLOGY, 2019, 16 (08) :509-520
[4]   Ataxia-telangiectasia: A review of clinical features and molecular pathology [J].
Amirifar, Parisa ;
Ranjouri, Mohammad Reza ;
Yazdani, Reza ;
Abolhassani, Hassan ;
Aghamohammadi, Asghar .
PEDIATRIC ALLERGY AND IMMUNOLOGY, 2019, 30 (03) :277-288
[5]   Dissecting the Causal Mechanism of X-Linked Dystonia-Parkinsonism by Integrating Genome and Transcriptome Assembly [J].
Aneichyk, Tatsiana ;
Hendriks, William T. ;
Yadav, Rachita ;
Shin, David ;
Gao, Dadi ;
Vaine, Christine A. ;
Collins, Ryan L. ;
Domingo, Aloysius ;
Currall, Benjamin ;
Stortchevoi, Alexei ;
Multhaupt-Buell, Trisha ;
Penney, Ellen B. ;
Cruz, Lilian ;
Dhakal, Jyotsna ;
Brand, Harrison ;
Hanscom, Carrie ;
Antolik, Caroline ;
Dy, Marisela ;
Ragavendran, Ashok ;
Underwood, Jason ;
Cantsilieris, Stuart ;
Munson, Katherine M. ;
Eichler, Evan E. ;
Acuna, Patrick ;
Go, Criscely ;
Jamora, R. Dominic G. ;
Rosales, Raymond L. ;
Church, Deanna M. ;
Williams, Stephen R. ;
Garcia, Sarah ;
Klein, Christine ;
Mueller, Ulrich ;
Wilhelmsen, Kirk C. ;
Timmers, H. T. Marc ;
Sapir, Yechiam ;
Wainger, Brian J. ;
Henderson, Daniel ;
Ito, Naoto ;
Weisenfeld, Neil ;
Jaffe, David ;
Sharma, Nutan ;
Breakefield, Xandra O. ;
Ozelius, Laurie J. ;
Bragg, D. Cristopher ;
Talkowski, Michael E. .
CELL, 2018, 172 (05) :897-+
[6]  
[Anonymous], EUDESMANE GLYCOSIDES, DOI [10.1021/acs.jnatprod.8b00841.s001, DOI 10.1021/ACS.JNATPROD.8B00841.S001]
[7]   Breakpoint Sequence Analysis of an AβPP Locus Duplication Associated with Autosomal Dominant Alzheimer's Disease and Severe Cerebral Amyloid Angiopathy [J].
Antonell, Anna ;
Gelpi, Ellen ;
Sanchez-Valle, Raquel ;
Martinez, Ramiro ;
Molinuevo, Jose L. ;
Llado, Albert .
JOURNAL OF ALZHEIMERS DISEASE, 2012, 28 (02) :303-308
[8]   Transposable Elements in Human Cancer: Causes and Consequences of Deregulation [J].
Anwar, Sumadi Lukman ;
Wulaningsih, Wahyu ;
Lehmann, Ulrich .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2017, 18 (05)
[9]   DNA repair protein Rad18 restricts LINE-1 mobility [J].
Ariumi, Yasuo ;
Kawano, Koudai ;
Yasuda-Inoue, Mariko ;
Kuroki, Misao ;
Fukuda, Hiroyuki ;
Siddiqui, Rokeya ;
Turelli, Priscilla ;
Tateishi, Satoshi .
SCIENTIFIC REPORTS, 2018, 8
[10]   Shuffling of genes within low-copy repeats on 22qll (LCR22) by Alu-mediated recombination events during evolution [J].
Babcock, M ;
Pavlicek, A ;
Spiteri, E ;
Kashork, CD ;
Ioshikhes, I ;
Shaffer, LG ;
Jurka, J ;
Morrow, BE .
GENOME RESEARCH, 2003, 13 (12) :2519-2532