Genomic analyses detect Eurasian-lineage H10 and additional H14 influenza A viruses recovered from waterfowl in the Central United States

被引:17
作者
Fries, Anthony C. [1 ,2 ]
Nolting, Jacqueline M. [1 ]
Bowman, Andrew S. [1 ]
Killian, Mary L. [3 ]
Wentworth, David E. [4 ]
Slemons, Richard D. [1 ]
机构
[1] Ohio State Univ, Dept Vet Prevent Med, Columbus, OH 43210 USA
[2] Ohio State Univ, Dept Ecol Evolut & Organismal Biol, Columbus, OH 43210 USA
[3] APHIS, Natl Vet Serv Labs, USDA, Ames, IA USA
[4] J Craig Venter Inst, Rockville, MD USA
基金
美国国家卫生研究院;
关键词
H10; subtype; H14; influenza A virus; migratory birds; surveillance; AVIAN INFLUENZA; EVOLUTION;
D O I
10.1111/irv.12250
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
The accurate and timely characterization of influenza A viruses (IAV) from natural reservoirs is essential for responses to animal and public health threats. Differences between antigenic and genetic subtyping results for 161 IAV isolates recovered from migratory birds in the central United States during 2010-2011 delayed the recognition of four isolates of interest. Genomic sequencing identified the first reported Eurasian-origin H10 subtype in North America and three additional H14 isolates showing divergence from previously reported H14 isolates. Genomic analyses revealed additional diversity among IAV isolates not detected by antigenic subtyping and provided further insight into interhemispheric spread of avian-origin IAVs.
引用
收藏
页码:493 / 498
页数:6
相关论文
共 15 条
[1]   Complete Genome Sequence of a Reassortant H14N2 Avian Influenza Virus from California [J].
Boyce, Walter M. ;
Schobel, Seth ;
Dugan, Vivien G. ;
Halpin, Rebecca ;
Lin, Xudong ;
Wentworth, David E. ;
Lindsay, LeAnn L. ;
Mertens, Eva ;
Plancarte, Magdalena .
GENOME ANNOUNCEMENTS, 2013, 1 (04)
[2]   Clinical and epidemiological characteristics of a fatal case of avian influenza A H10N8 virus infection : a descriptive study [J].
Chen, HaiYing ;
Yuan, Hui ;
Gao, Rongbao ;
Zhang, Jinxiang ;
Wang, Dayan ;
Xiong, Ying ;
Fan, GuoYin ;
Yang, Fan ;
Li, Xiaodan ;
Zhou, Jianfang ;
Zou, Shumei ;
Yang, Lei ;
Chen, Tao ;
Dong, Libo ;
Bo, Hong ;
Zhao, Xiang ;
Zhang, Ye ;
Lan, Yu ;
Bai, Tian ;
Dong, Jie ;
Li, Qun ;
Wang, ShiWen ;
Zhang, YanPing ;
Li, Hui ;
Gong, Tian ;
Shi, Yong ;
Ni, Xiansheng ;
Li, Jianxiong ;
Zhou, Jun ;
Fan, Jiyi ;
Wu, Jingwen ;
Zhou, Xianfeng ;
Hu, Maohong ;
Wan, Jianguo ;
Yang, WeiZhong ;
Li, DeXin ;
Wu, Guizhen ;
Feng, ZiJian ;
Gao, George F. ;
Wang, Yu ;
Jin, Qi ;
Liu, Mingbin ;
Shu, Yuelong .
LANCET, 2014, 383 (9918) :714-721
[3]   Evidence for the Circulation and Inter-Hemispheric Movement of the H14 Subtype Influenza A Virus [J].
Fries, Anthony C. ;
Nolting, Jacqueline M. ;
Danner, Angela ;
Webster, Robert G. ;
Bowman, Andrew S. ;
Krauss, Scott ;
Slemons, Richard D. .
PLOS ONE, 2013, 8 (03)
[4]   Influence of host species on the evolution of the nonstructural (NS) gene of influenza A viruses [J].
Kawaoka, Y ;
Gorman, OT ;
Ito, T ;
Wells, K ;
Donis, RO ;
Castrucci, MR ;
Donatelli, I ;
Webster, RG .
VIRUS RESEARCH, 1998, 55 (02) :143-156
[5]   MOLECULAR CHARACTERIZATION OF A NEW HEMAGGLUTININ, SUBTYPE-H14, OF INFLUENZA-A VIRUS [J].
KAWAOKA, Y ;
YAMNIKOVA, S ;
CHAMBERS, TM ;
LVOV, DK ;
WEBSTER, RG .
VIROLOGY, 1990, 179 (02) :759-767
[6]   Genetic evidence of intercontinental movement of avian influenza in a migratory bird: the northern pintail (Anas acuta) [J].
Koehler, Anson V. ;
Pearce, John M. ;
Flint, Paul L. ;
Franson, J. Christian ;
Ip, Hon S. .
MOLECULAR ECOLOGY, 2008, 17 (21) :4754-4762
[7]  
Nolting J, 2012, PLOS CURR
[8]   Global patterns of influenza A virus in wild birds [J].
Olsen, B ;
Munster, VJ ;
Wallensten, A ;
Waldenström, J ;
Osterhaus, ADME ;
Fouchier, RAM .
SCIENCE, 2006, 312 (5772) :384-388
[9]   MODELTEST: testing the model of DNA substitution [J].
Posada, D ;
Crandall, KA .
BIOINFORMATICS, 1998, 14 (09) :817-818
[10]   GENOMIC ANALYSIS OF AVIAN INFLUENZA VIRUSES FROM WATERFOWL IN WESTERN ALASKA, USA [J].
Reeves, Andrew B. ;
Pearce, John M. ;
Ramey, Andrew M. ;
Ely, Craig R. ;
Schmutz, Joel A. ;
Flint, Paul L. ;
Derksen, Dirk V. ;
Ip, Hon S. ;
Trust, Kimberly A. .
JOURNAL OF WILDLIFE DISEASES, 2013, 49 (03) :600-610