New models for human disease from the International Mouse Phenotyping Consortium

被引:47
作者
Cacheiro, Pilar [1 ]
Haendel, Melissa A. [2 ,3 ]
Smedley, Damian [1 ]
Meehan, Terrence
Mason, Jeremy
Mashhadi, Hamed Haseli
Munoz-Fuentes, Violeta
Tocchini, Glauco
Lloyd, Kent K. C.
McKerlie, Colin
Bower, Lynette
Clary, Dave
Nutter, Lauryl M. J.
Flenniken, Ann M.
Teboul, Lydia
Codner, Gemma
Wells, Sara
Herault, Yann
Sorg, Tania
Vasseurm, Laurent
Selloum, Mohammed
Roux, Michel
Jacobs, Hugues
Meziane, Hamid
Champy, Marie-France
About, Ghina Bou
Murray, Steve
Chesler, Elissa
Kumar, Vivek
White, Jacqui
Braun, Robert E.
Beaudet, Arthur L.
Dickinson, Mary E.
Heaney, Jason D.
Lorenzo, Isabel
Lanza, Denise G.
Reynolds, Corey L.
Ward, Christopher S.
Samaco, Rodney C.
Veeraragavan, Surabi
Hsu, Chih-Wei
Christianson, Audrey E.
Gallegos, Juan J.
Seavitt, John Richard
Gaspero, Angelina
Green, Jennie R.
Garza
Garza, Arturo
Bohat, Ritu
Sedlacek, Radislav
机构
[1] Queen Mary Univ London, Sch Med & Dent, William Harvey Res Inst, London, England
[2] Oregon State Univ, Linus Pauling Inst, Corvallis, OR 97331 USA
[3] Oregon State Univ, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
基金
美国国家卫生研究院;
关键词
INFORMATICS PLATFORM; PLEIOTROPY; DISCOVERY;
D O I
10.1007/s00335-019-09804-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human disease through cross-species comparison by computing the similarity between the phenotypes observed in the mutant mice and the human phenotypes associated to their orthologous loci in Mendelian disease. Here, we present an update on the novel disease models available from the most recent data release (DR10.0), with 5861 mouse genes fully or partially phenotyped and a total number of 69,982 phenotype calls reported. With approximately one-third of human Mendelian genes with orthologous null mouse phenotypes described, the range of available models relevant for human diseases keeps increasing. Among the breadth of new data, we identify previously uncharacterized disease genes in the mouse and additional phenotypes for genes with existing mutant lines mimicking the associated disorder. The automated and unbiased discovery of relevant models for all types of rare diseases implemented by the IMPC constitutes a powerful tool for human genetics and precision medicine.
引用
收藏
页码:143 / 150
页数:8
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