Publishing and sharing multi-dimensional image data with OMERO

被引：27

作者：

Burel, Jean-Marie ^{[1
]}

Besson, Sebastien ^{[1
]}

Blackburn, Colin ^{[1
]}

Carroll, Mark ^{[1
]}

Ferguson, Richard K. ^{[1
]}

Flynn, Helen ^{[1
]}

Gillen, Kenneth ^{[1
]}

Leigh, Roger ^{[1
]}

Li, Simon ^{[1
]}

Lindner, Dominik ^{[1
]}

Linkert, Melissa ^{[2
]}

Moore, William J. ^{[1
]}

Ramalingam, Balaji ^{[1
]}

Rozbicki, Emil ^{[2
]}

Tarkowska, Aleksandra ^{[1
]}

Walczysko, Petr ^{[1
]}

Allan, Chris ^{[2
]}

Moore, Josh ^{[1
,2
]}

Swedlow, Jason R. ^{[1
,2
]}

机构：

[1] Univ Dundee, Ctr Gene Regulat & Express, Dundee, Scotland

[2] Glencoe Software Inc, Seattle, WA USA

来源：

MAMMALIAN GENOME | 2015年 / 26卷 / 9-10期

基金：

英国生物技术与生命科学研究理事会; 英国惠康基金;

关键词：

FLUORESCENCE MICROSCOPY; EXPERIMENTAL BIOLOGY; MANAGEMENT;

D O I：

10.1007/s00335-015-9587-6

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Imaging data are used in the life and biomedical sciences to measure the molecular and structural composition and dynamics of cells, tissues, and organisms. Datasets range in size from megabytes to terabytes and usually contain a combination of binary pixel data and metadata that describe the acquisition process and any derived results. The OMERO image data management platform allows users to securely share image datasets according to specific permissions levels: data can be held privately, shared with a set of colleagues, or made available via a public URL. Users control access by assigning data to specific Groups with defined membership and access rights. OMERO's Permission system supports simple data sharing in a lab, collaborative data analysis, and even teaching environments. OMERO software is open source and released by the OME Consortium at www.openmicroscopy.org.

引用

页码：441 / 447

页数：7

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