The complete chloroplast genome sequence of desert poplar (Populus euphratica)

被引：13
|
作者：
Zhang, Qun-jie [1 ,2 ]
Gao, Li-zhi [1 ]
机构：
[1] Chinese Acad Sci, Germplasm Bank Wild Species Southwest China, Kunming Inst Bot, Plant Germplasm & Genom Ctr, Kunming 650204, Peoples R China
[2] Univ Chinese Acad Sci, Beijing, Peoples R China
来源：
MITOCHONDRIAL DNA PART A | 2016年 / 27卷 / 01期
基金：
美国国家科学基金会;
关键词：
Chloroplast genome; plastid; Populus euphratica; EXPRESSION; TOOL;
D O I：
10.3109/19401736.2014.913159
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
The complete chloroplast sequence of the desert poplar (Populus euphratica), a plant well-adapted to salt stress, was determined in this study. The genome consists of 156,766bp containing a pair of inverted repeats (IRs) of 16,591bp separated by a large single-copy region and a small single-copy region of 84,888bp and 27,646bp, respectively. The chloroplast genome contains 130 known genes, including 89 protein-coding genes, 8 ribosomal RNA genes, and 37 tRNA genes; 18 of these are located in the inverted repeat region.
引用
收藏
页码：721 / 723
页数：3
相关论文
共 50 条
  • [1] Complete chloroplast genome sequence of Populus euphratica from PacBio Sequel platform
    Jiang, Zhen-Bo
    Zhai, Jun-Tuan
    Jiao, Pei-Pei
    Yang, Tian-Ge
    Wu, Zhi-Hua
    Li, Zhi-Jun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 378 - 380
  • [2] Genome-scale transcriptome analysis of the desert poplar, Populus euphratica
    Qiu, Qiang
    Ma, Tao
    Hu, Quanjun
    Liu, Bingbing
    Wu, Yuxia
    Zhou, Haihong
    Wang, Qian
    Wang, Juan
    Liu, Jianquan
    TREE PHYSIOLOGY, 2011, 31 (04) : 452 - 461
  • [3] The complete chloroplast genome sequence of Populus afghanica
    Li, Yi
    Tian, Yang
    Liu, Shuyu
    Keram, Bahtiyar
    Zhang, Jianguo
    Wang, Zhaoshan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1723 - 1724
  • [4] The complete chloroplast genome sequence of Populus wulianensis
    Wang, Yan
    Li, Wen-Qing
    Xie, Xiao-Man
    Wang, Ning
    Han, Yi
    Liu, Li-Jiang
    Sun, Tao
    Wang, Hao
    Xu, Ji-Chen
    Lu, Yi-Zeng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1657 - 1658
  • [5] Improved genome assembly provides new insights into genome evolution in a desert poplar (Populus euphratica)
    Zhang, Zhiyang
    Chen, Yang
    Zhang, Junlin
    Ma, Xinzhi
    Li, Yiling
    Li, Mengmeng
    Wang, Deyan
    Kang, Minghui
    Wu, Haolin
    Yang, Yongzhi
    Olson, Matthew S.
    DiFazio, Stephen P.
    Wan, Dongshi
    Liu, Jianquan
    Ma, Tao
    MOLECULAR ECOLOGY RESOURCES, 2020, 20 (03) : 781 - 794
  • [6] The complete chloroplast genome sequence of Populus mexicana (Salicaceae)
    Hou, Zhe
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 174 - 175
  • [7] The complete chloroplast genome sequence of Populus tremula (Salicaceae)
    Li, Ang
    Hou, Zhe
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2195 - 2196
  • [8] The complete chloroplast genome sequence of Populus tremuloides (Salicaceae)
    Li, Ang
    Hou, Zhe
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3921 - 3922
  • [9] The complete chloroplast genome sequence of Populus davidiana (Salicaceae)
    Yu, Haiyan
    Zhang, Li
    Zang, Jin
    Xiao, Liandong
    Luo, Jiancheng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2215 - 2216
  • [10] The complete chloroplast genome sequence of Populus davidiana Dode
    Choi, Mi Na
    Han, Muho
    Park, Hong-Seog
    Kim, Min-Young
    Kim, Ji-Seon
    Na, Yoon-Jeong
    Sim, Seung-Woo
    Park, Eung-Jun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01): : 674 - 675
12345