An automated barcode tracking system for behavioural studies in birds

被引:52
作者
Alarcon-Nieto, Gustavo [1 ]
Graving, Jacob M. [1 ,2 ]
Klarevas-Irby, James A. [1 ]
Maldonado-Chaparro, Adriana A. [1 ,2 ]
Mueller, Inge [3 ]
Farine, Damien R. [1 ,2 ]
机构
[1] Univ Konstanz, Dept Biol, Chair Biodivers & Collect Behav, Constance, Germany
[2] Max Planck Inst Ornithol, Dept Collect Behav, Constance, Germany
[3] Max Planck Inst Ornithol, Dept Migrat & Immunoecol, Radolfzell am Bodensee, Germany
来源
METHODS IN ECOLOGY AND EVOLUTION | 2018年 / 9卷 / 06期
关键词
animal behaviour; automated tracking; collective behaviour; group living; population ecology; social interactions; ZEBRA FINCHES; BLUE TITS; TAENIOPYGIA-GUTTATA; IDENTIFICATION; INDIVIDUALS; NETWORKS; PATTERNS; NEST;
D O I
10.1111/2041-210X.13005
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
1. Recent advances in technology allow researchers to automate the measurement of animal behaviour. These methods have multiple advantages over direct observations and manual data input as they reduce bias related to human perception and fatigue, and deliver more extensive and complete datasets that enhance statistical power. One major challenge that automation can overcome is the observation of many individuals at once, enabling whole-group or whole-population tracking. 2. We provide a detailed description of an automated system for tracking birds. Our system uses printed, machine-readable codes mounted on backpacks. This simple, yet robust, tagging system can be used simultaneously on multiple individuals to provide data on bird identity, position and directionality. Furthermore, because the backpacks are printed on paper, they are very lightweight. We show that our method is reliable, relatively easy to implement and monitor, and with proper handling, has proved to be safe for the birds over long periods of time. 3. We describe the deployment procedure of this system for a captive population of songbirds. We test different camera options, and discuss their advantages and disadvantages. In particular, we highlight how using single-board computers to control the frequency and duration of image capture makes this system affordable and adaptable to a range of study systems and research questions. 4. The ability to automate the measurement of individual positions has the potential to significantly increase the power of both observational and experimental studies. The system can capture both detailed interactions (using video recordings) and repeated observations (e.g. once per second for the entire day) of individuals over long timescales (months or potentially years). This approach opens the door to tracking life-long relationships among individuals, while also capturing fine-scale differences in behaviour.
引用
收藏
页码:1536 / 1547
页数:12
相关论文
共 54 条
[1]   Long-distance seed dispersal by straw-coloured fruit bats varies by season and landscape [J].
Abedi-Lartey, Michael ;
Dechmann, Dina K. N. ;
Wikelski, Martin ;
Scharf, Anne K. ;
Fahr, Jakob .
GLOBAL ECOLOGY AND CONSERVATION, 2016, 7 :12-24
[2]   Feeder use predicts both acquisition and transmission of a contagious pathogen in a North American songbird [J].
Adelman, James S. ;
Moyers, Sahnzi C. ;
Farine, Damien R. ;
Hawley, Dana M. .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2015, 282 (1815)
[3]   Experimentally induced innovations lead to persistent culture via conformity in wild birds [J].
Aplin, Lucy M. ;
Farine, Damien R. ;
Morand-Ferron, Julie ;
Cockburn, Andrew ;
Thornton, Alex ;
Sheldon, Ben C. .
NATURE, 2015, 518 (7540) :538-541
[4]  
Berger-Wolf TY, 2015, BLOOMB DAT GOOD EXCH, P1
[5]  
Boarman WI, 1998, WILDLIFE SOC B, V26, P886
[6]   Daily foraging patterns in free-living birds: exploring the predation-starvation trade-off [J].
Bonter, David N. ;
Zuckerberg, Benjamin ;
Sedgwick, Carolyn W. ;
Hochachka, Wesley M. .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2013, 280 (1760)
[7]   Applications of radio frequency identification (RFID) in ornithological research: a review [J].
Bonter, David N. ;
Bridge, Eli S. .
JOURNAL OF FIELD ORNITHOLOGY, 2011, 82 (01) :1-10
[8]   Developmental stress predicts social network position [J].
Boogert, Neeltje J. ;
Farine, Damien R. ;
Spencer, Karen A. .
BIOLOGY LETTERS, 2014, 10 (10)
[9]   Effect of tagging marine turtles on nesting behaviour and reproductive success [J].
Broderick, AC ;
Godley, BJ .
ANIMAL BEHAVIOUR, 1999, 58 :587-591
[10]   BEEtag: A Low-Cost, Image-Based Tracking System for the Study of Animal Behavior and Locomotion [J].
Crall, James D. ;
Gravish, Nick ;
Mountcastle, Andrew M. ;
Combes, Stacey A. .
PLOS ONE, 2015, 10 (09)