Engineering glutathione S-transferase with a point mutation at conserved F136 residue increases the xenobiotic-metabolizing activity

被引:6
作者
Kalita, Jupitara [1 ]
Shukla, Harish [1 ]
Tripathi, Timir [1 ]
机构
[1] North Eastern Hill Univ, Mol & Struct Biophys Lab, Dept Biochem, Shillong 793022, Meghalaya, India
关键词
Glutathione S-transferase; Detoxification; CDNB; Xenobiotics; Gain-of-function activity; Point mutation; Enzyme engineering; Site-directed mutagenesis; Molecular dynamics simulation; DIRECTED EVOLUTION; INHIBITORS; SITE; DETOXIFICATION; TOLERANCE; NETWORK; ENZYMES; GST;
D O I
10.1016/j.ijbiomac.2020.07.073
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Glutathione S-transferases (GSTs) are multifunctional enzymes that play major roles in a wide range of biological processes, including cellular detoxification, biosynthesis, metabolism, and transport. The dynamic structural scaffold and diverse functional roles of GSTs make them important for enzyme engineering and for exploring novel biotechnological applications. The present study reported a significant gain-of-function activity in GST caused by a point mutation at the conserved F136 residue. The fluorescence quenching and kinetic data suggested that both binding affinity and catalytic efficiency of the mutant enzyme to the substrates 1-chloro-2,4-dinitrobenzene (CDNB), as well as the glutathione (GSH), is increased. Molecular docking showed that the mutation improves the binding interactions of the GSH with several binding-site residues. The simulation of molecular dynamics revealed that the mutant enzyme gained increased structural rigidity than the wild-type enzyme. The mutation also altered the residue interaction network (RIN) of the GSH-binding residues. These phenomena suggested that mutations led to conformational alterations and dominant differential motions in the enzyme that lead to increased rigidity and modifications in RIN. Collectively, engineering GST with a single point mutation at conserved F136 can significantly increase its xenobiotic activity by increasing the catalytic efficiency that may be exploited for biotechnological applications. (C) 2020 Elsevier B.V. All rights reserved.
引用
收藏
页码:1117 / 1126
页数:10
相关论文
共 51 条
[1]   Design of a monomeric human glutathione transferase GSTP1, a structurally stable but catalytically inactive protein [J].
Abdalla, AM ;
Bruns, CM ;
Tainer, JA ;
Mannervik, B ;
Stenberg, G .
PROTEIN ENGINEERING, 2002, 15 (10) :827-834
[2]   Pesticide use and application: An Indian scenario [J].
Abhilash, P. C. ;
Singh, Nandita .
JOURNAL OF HAZARDOUS MATERIALS, 2009, 165 (1-3) :1-12
[3]   ESSENTIAL DYNAMICS OF PROTEINS [J].
AMADEI, A ;
LINSSEN, ABM ;
BERENDSEN, HJC .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1993, 17 (04) :412-425
[4]   Structure, catalytic mechanism, and evolution of the glutathione transferases [J].
Armstrong, RN .
CHEMICAL RESEARCH IN TOXICOLOGY, 1997, 10 (01) :2-18
[5]   Directed evolution of glutathione transferases towards a selective glutathione-binding site and improved oxidative stability [J].
Axarli, Irine ;
Muleta, Abdi W. ;
Chronopoulou, Evangelia G. ;
Papageorgiou, Anastassios C. ;
Labrou, Nikolaos E. .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 2017, 1861 (01) :3416-3428
[6]   Directed evolution of Tau class glutathione transferases reveals a site that regulates catalytic efficiency and masks co-operativity [J].
Axarli, Irine ;
Muleta, Abdi W. ;
Vlachakis, Dimitrios ;
Kossida, Sophia ;
Kotzia, Georgia ;
Maltezos, Anastasios ;
Dhavala, Prathusha ;
Papageorgiou, Anastassios C. ;
Labrou, Nikolaos E. .
BIOCHEMICAL JOURNAL, 2016, 473 :559-570
[7]   Highly Ordered Protein Nanorings Designed by Accurate Control of Glutathione S-Transferase Self-Assembly [J].
Bai, Yushi ;
Luo, Quan ;
Zhang, Wei ;
Miao, Lu ;
Xu, Jiayun ;
Li, Hongbin ;
Liu, Junqiu .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (30) :10966-10969
[8]   UNFOLDING FREE-ENERGY CHANGES DETERMINED BY THE LINEAR EXTRAPOLATION METHOD .2. INCORPORATION OF DELTA-G-DEGREES-N-U VALUES IN A THERMODYNAMIC CYCLE [J].
BOLEN, DW ;
SANTORO, MM .
BIOCHEMISTRY, 1988, 27 (21) :8069-8074
[9]   Inhibition of human glutathione transferases by pesticides: Development of a simple analytical assay for the quantification of pesticides in water [J].
Chronopoulou, Evangelia G. ;
Papageorgiou, Anastassios C. ;
Markoglou, Anastassios ;
Labrou, Nikolaos E. .
JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, 2012, 81 :43-51
[10]   Enhanced tolerance and remediation of anthracene by transgenic tobacco plants expressing a fungal glutathione transferase gene [J].
Dixit, Prachy ;
Mukherjee, Prasun K. ;
Sherkhane, Pramod D. ;
Kale, Sharad P. ;
Eapen, Susan .
JOURNAL OF HAZARDOUS MATERIALS, 2011, 192 (01) :270-276