Genetic prediction of male pattern baldness

被引:99
作者
Hagenaars, Saskia P. [1 ,2 ,3 ]
Hill, W. David [1 ,2 ]
Harris, Sarah E. [1 ,4 ]
Ritchie, Stuart J. [1 ,2 ]
Davies, Gail [1 ,2 ]
Liewald, David C. [1 ]
Gale, Catharine R. [1 ,2 ,5 ]
Porteous, David J. [1 ,4 ]
Deary, Ian J. [1 ,2 ]
Marioni, Riccardo E. [1 ,4 ]
机构
[1] Univ Edinburgh, Ctr Cognit Ageing & Cognit Epidemiol, Edinburgh, Midlothian, Scotland
[2] Univ Edinburgh, Dept Psychol, Edinburgh, Midlothian, Scotland
[3] Univ Edinburgh, Div Psychiat, Edinburgh, Midlothian, Scotland
[4] Univ Edinburgh, Inst Genet & Mol Med, Ctr Genom & Expt Med, Edinburgh, Midlothian, Scotland
[5] Univ Southampton, Lifecourse Epidemiol Unit, Med Res Council, Southampton, Hants, England
基金
英国生物技术与生命科学研究理事会; 英国医学研究理事会;
关键词
GENOME-WIDE ASSOCIATION; PROSTATE-CANCER; ANDROGENETIC ALOPECIA; HAIR LOSS; RISK; MEN; DIFFERENTIATION; HERITABILITY; REGULATOR; DYSPLASIA;
D O I
10.1371/journal.pgen.1006594
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Male pattern baldness can have substantial psychosocial effects, and it has been phenotypically linked to adverse health outcomes such as prostate cancer and cardiovascular disease. We explored the genetic architecture of the trait using data from over 52,000 male participants of UK Biobank, aged 40-69 years. We identified over 250 independent genetic loci associated with severe hair loss (P<5x10(-8)). By splitting the cohort into a discovery sample of 40,000 and target sample of 12,000, we developed a prediction algorithm based entirely on common genetic variants that discriminated (AUC = 0.78, sensitivity = 0.74, specificity = 0.69, PPV = 59%, NPV = 82%) those with no hair loss from those with severe hair loss. The results of this study might help identify those at greatest risk of hair loss, and also potential genetic targets for intervention.
引用
收藏
页数:16
相关论文
共 61 条
[11]   Susceptibility variants on chromosome 7p21.1 suggest HDAC9 as a new candidate gene for male-pattern baldness [J].
Brockschmidt, F. F. ;
Heilmann, S. ;
Ellis, J. A. ;
Eigelshoven, S. ;
Hanneken, S. ;
Herold, C. ;
Moebus, S. ;
Alblas, M. A. ;
Lippke, B. ;
Kluck, N. ;
Priebe, L. ;
Degenhardt, F. A. ;
Jamra, R. A. ;
Meesters, C. ;
Joeckel, K. -H. ;
Erbel, R. ;
Harrap, S. ;
Schumacher, J. ;
Froehlich, H. ;
Kruse, R. ;
Hillmer, A. M. ;
Becker, T. ;
Noethen, M. M. .
BRITISH JOURNAL OF DERMATOLOGY, 2011, 165 (06) :1293-1302
[12]   LD Score regression distinguishes confounding from polygenicity in genome-wide association studies [J].
Bulik-Sullivan, Brendan K. ;
Loh, Po-Ru ;
Finucane, Hilary K. ;
Ripke, Stephan ;
Yang, Jian ;
Patterson, Nick ;
Daly, Mark J. ;
Price, Alkes L. ;
Neale, Benjamin M. .
NATURE GENETICS, 2015, 47 (03) :291-+
[13]   Coat Variation in the Domestic Dog Is Governed by Variants in Three Genes [J].
Cadieu, Edouard ;
Neff, Mark W. ;
Quignon, Pascale ;
Walsh, Kari ;
Chase, Kevin ;
Parker, Heidi G. ;
VonHoldt, Bridgett M. ;
Rhue, Alison ;
Boyko, Adam ;
Byers, Alexandra ;
Wong, Aaron ;
Mosher, Dana S. ;
Elkahloun, Abdel G. ;
Spady, Tyrone C. ;
Andre, Catherine ;
Lark, K. Gordon ;
Cargill, Michelle ;
Bustamante, Carlos D. ;
Wayne, Robert K. ;
Ostrander, Elaine A. .
SCIENCE, 2009, 326 (5949) :150-153
[14]  
Cash TF, 1999, BRIT J DERMATOL, V141, P398
[15]   Second-generation PLINK: rising to the challenge of larger and richer datasets [J].
Chang, Christopher C. ;
Chow, Carson C. ;
Tellier, Laurent C. A. M. ;
Vattikuti, Shashaank ;
Purcell, Shaun M. ;
Lee, James J. .
GIGASCIENCE, 2015, 4
[16]  
Christoffersen M, 2013, CIRCULATION
[17]   Androgenic alopecia is not useful as an indicator of men at high risk of prostate cancer [J].
Cremers, Ruben G. ;
Aben, Katja K. ;
Vermeulen, Sita H. ;
den Heijer, Martin ;
van Oort, Inge M. ;
Kiemeney, Lambertus A. .
EUROPEAN JOURNAL OF CANCER, 2010, 46 (18) :3294-3299
[18]   Genome-wide association study of cognitive functions and educational attainment in UK Biobank (N=112151) [J].
Davies, G. ;
Marioni, R. E. ;
Liewald, D. C. ;
Hill, W. D. ;
Hagenaars, S. P. ;
Harris, S. E. ;
Ritchie, S. J. ;
Luciano, M. ;
Fawns-Ritchie, C. ;
Lyall, D. ;
Cullen, B. ;
Cox, S. R. ;
Hayward, C. ;
Porteous, D. J. ;
Evans, J. ;
McIntosh, A. M. ;
Gallacher, J. ;
Craddock, N. ;
Pell, J. P. ;
Smith, D. J. ;
Gale, C. R. ;
Deary, I. J. .
MOLECULAR PSYCHIATRY, 2016, 21 (06) :758-767
[19]   MAGMA: Generalized Gene-Set Analysis of GWAS Data [J].
de Leeuw, Christiaan A. ;
Mooij, Joris M. ;
Heskes, Tom ;
Posthuma, Danielle .
PLOS COMPUTATIONAL BIOLOGY, 2015, 11 (04)
[20]   PRSice: Polygenic Risk Score software [J].
Euesden, Jack ;
Lewis, Cathryn M. ;
O'Reilly, Paul F. .
BIOINFORMATICS, 2015, 31 (09) :1466-1468