Efficient targeting of expressed and silent genes in human ESCs and iPSCs using zinc-finger nucleases

被引:792
作者
Hockemeyer, Dirk [1 ]
Soldner, Frank [1 ]
Beard, Caroline [1 ]
Gao, Qing [1 ]
Mitalipova, Maisam [1 ]
DeKelver, Russell C. [3 ]
Katibah, George E. [3 ]
Amora, Ranier [3 ]
Boydston, Elizabeth A. [3 ]
Zeitler, Bryan [3 ]
Meng, Xiangdong [3 ]
Miller, Jeffrey C. [3 ]
Zhang, Lei [3 ]
Rebar, Edward J. [3 ]
Gregory, Philip D. [3 ]
Urnov, Fyodor D. [3 ]
Jaenisch, Rudolf [1 ,2 ]
机构
[1] Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
[2] MIT, Dept Biol, Cambridge, MA USA
[3] Sangamo BioSci Inc, Richmond, CA USA
基金
美国国家卫生研究院;
关键词
EMBRYONIC STEM-CELLS; HOMOLOGOUS RECOMBINATION; SOMATIC-CELLS; ELECTROPORATION; IDENTIFICATION; PLURIPOTENCY; INTEGRATION; DISEASE; LOCUS; LINE;
D O I
10.1038/nbt.1562
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Realizing the full potential of human embryonic stem cells (hESCs) and induced pluripotent stem cells (hiPSCs) requires efficient methods for genetic modification. However, techniques to generate cell type-specific lineage reporters, as well as reliable tools to disrupt, repair or overexpress genes by gene targeting, are inefficient at best and thus are not routinely used. Here we report the highly efficient targeting of three genes in human pluripotent cells using zinc-finger nuclease (ZFN)-mediated genome editing. First, using ZFNs specific for the OCT4 (POU5F1) locus, we generated OCT4-eGFP reporter cells to monitor the pluripotent state of hESCs. Second, we inserted a transgene into the AAVS1 locus to generate a robust drug-inducible overexpression system in hESCs. Finally, we targeted the PITX3 gene, demonstrating that ZFNs can be used to generate reporter cells by targeting non-expressed genes in hESCs and hiPSCs.
引用
收藏
页码:851 / U110
页数:9
相关论文
共 31 条
[1]  
Bibikova M, 2002, GENETICS, V161, P1169
[2]   Sequential expression of pluripotency markers during direct reprogramming of mouse somatic cells [J].
Brambrink, Tobias ;
Foreman, Ruth ;
Welstead, G. Grant ;
Lengner, Christopher J. ;
Wernig, Marius ;
Suh, Heikyung ;
Jaenisch, Rudolf .
CELL STEM CELL, 2008, 2 (02) :151-159
[3]   Targeted transgene integration in plant cells using designed zinc finger nucleases [J].
Cai, Charles Q. ;
Doyon, Yannick ;
Ainley, W. Michael ;
Miller, Jeffrey C. ;
DeKelver, Russell C. ;
Moehle, Erica A. ;
Rock, Jeremy M. ;
Lee, Ya-Li ;
Garrison, Robbi ;
Schulenberg, Lisa ;
Blue, Ryan ;
Worden, Andrew ;
Baker, Lisa ;
Faraji, Farhoud ;
Zhang, Lei ;
Holmes, Michael C. ;
Rebar, Edward J. ;
Collingwood, Trevor N. ;
Rubin-Wilson, Beth ;
Gregory, Philip D. ;
Urnov, Fyodor D. ;
Petolino, Joseph F. .
PLANT MOLECULAR BIOLOGY, 2009, 69 (06) :699-709
[4]   Progress and prospects: Zinc-finger nucleases as gene therapy agents [J].
Carroll, D. .
GENE THERAPY, 2008, 15 (22) :1463-1468
[5]   A method for genetic modification of human embryonic stem cells using electroporation [J].
Costa, Magdaline ;
Dottori, Mirella ;
Sourris, Koula ;
Jamshidi, Pegah ;
Hatzistavrou, Tanya ;
Davis, Richard ;
Azzola, Lisa ;
Jackson, Steven ;
Lim, Sue Mei ;
Pera, Martin ;
Elefanty, Andrew G. ;
Stanley, Edouard G. .
NATURE PROTOCOLS, 2007, 2 (04) :792-796
[6]   Targeting a GFP reporter gene to the MIXL1 locus of human embryonic stem cells identifies human primitive streak-like cells and enables isolation of primitive hematopoietic precursors [J].
Davis, Richard P. ;
Ng, Elizabeth S. ;
Costa, Magdaline ;
Mossman, Anna K. ;
Sourris, Koula ;
Elefanty, Andrew G. ;
Stanley, Edouard G. .
BLOOD, 2008, 111 (04) :1876-1884
[7]   Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases [J].
Doyon, Yannick ;
McCammon, Jasmine M. ;
Miller, Jeffrey C. ;
Faraji, Farhoud ;
Ngo, Catherine ;
Katibah, George E. ;
Amora, Rainier ;
Hocking, Toby D. ;
Zhang, Lei ;
Rebar, Edward J. ;
Gregory, Philip D. ;
Urnov, Fyodor D. ;
Amacher, Sharon L. .
NATURE BIOTECHNOLOGY, 2008, 26 (06) :702-708
[8]   Knockout Rats via Embryo Microinjection of Zinc-Finger Nucleases [J].
Geurts, Aron M. ;
Cost, Gregory J. ;
Freyvert, Yevgeniy ;
Zeitler, Bryan ;
Miller, Jeffrey C. ;
Choi, Vivian M. ;
Jenkins, Shirin S. ;
Wood, Adam ;
Cui, Xiaoxia ;
Meng, Xiangdong ;
Vincent, Anna ;
Lam, Stephen ;
Michalkiewicz, Mieczyslaw ;
Schilling, Rebecca ;
Foeckler, Jamie ;
Kalloway, Shawn ;
Weiler, Hartmut ;
Menoret, Severine ;
Anegon, Ignacio ;
Davis, Gregory D. ;
Zhang, Lei ;
Rebar, Edward J. ;
Gregory, Philip D. ;
Urnov, Fyodor D. ;
Jacob, Howard J. ;
Buelow, Roland .
SCIENCE, 2009, 325 (5939) :433-433
[9]   A drug-inducible system for direct reprogramming of human somatic cells to pluripotency [J].
Hockemeyer, Dirk ;
Soldner, Frank ;
Cook, Elizabeth G. ;
Gao, Qing ;
Mitalipova, Maisam ;
Jaenisch, Rudolf .
CELL STEM CELL, 2008, 3 (03) :346-353
[10]   Identification and targeting of the ROSA26 locus in human embryonic stem cells [J].
Irion, Stefan ;
Luche, Herve ;
Gadue, Paul ;
Fehling, Hans Joerg ;
Kennedy, Marion ;
Keller, Gordon .
NATURE BIOTECHNOLOGY, 2007, 25 (12) :1477-1482