GC-biased gene conversion links the recombination landscape and demography to genomic base composition GC-biased gene conversion drives genomic base composition across a wide range of species

被引:51
|
作者
Mugal, Carina F. [1 ]
Weber, Claudia C. [1 ,2 ]
Ellegren, Hans [1 ]
机构
[1] Uppsala Univ, Dept Evolutionary Biol, Evolutionary Biol Ctr, Uppsala, Sweden
[2] Temple Univ, Dept Biol, Ctr Computat Genet & Genom, Philadelphia, PA 19122 USA
关键词
base composition; GC content; gene conversion; recombination; DOUBLE-STRAND BREAKS; MEIOTIC RECOMBINATION; CONTENT EVOLUTION; DNA METHYLATION; SPONTANEOUS MUTATIONS; SEQUENCE EVOLUTION; MAMMALIAN GENOMES; PROVIDES INSIGHTS; ISOCHORES; PATTERNS;
D O I
10.1002/bies.201500058
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The origin and evolutionary dynamics of the spatial heterogeneity in genomic base composition have been debated since its discovery in the 1970s. With the recent availability of numerous genome sequences from a wide range of species it has been possible to address this question from a comparative perspective, and similarities and differences in base composition between groups of organisms are becoming evident. Ample evidence suggests that the contrasting dynamics of base composition are driven by GC-biased gene conversion (gBGC), a process that is associated with meiotic recombination. In line with this hypothesis, base composition is associated with the rate of recombination and the evolutionary dynamics of the recombination landscape, therefore, governs base composition. In addition, and at first sight perhaps surprisingly, the relationship between demography and genomic base composition is in agreement with the gBGC hypothesis: organisms with larger populations have higher GC content than those with smaller populations.
引用
收藏
页码:1317 / 1326
页数:10
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