Highly Pathogenic Avian Influenza Clade 2.3.4.4b Subtype H5N8 Virus Isolated from Mandarin Duck in South Korea, 2020

被引：35

作者：

Jeong, Sol ^{[1
]}

Lee, Dong-Hun ^{[2
]}

Kwon, Jung-Hoon ^{[3
]}

Kim, Yu-Jin ^{[1
]}

Lee, Sun-Hak ^{[1
]}

Cho, Andrew Y. ^{[1
]}

Kim, Tae-Hyeon ^{[1
]}

Park, Jung-Eun ^{[4
]}

Lee, Song-, I ^{[5
]}

Song, Chang-Seon ^{[1
]}

机构：

[1] Konkuk Univ, Coll Vet Med, Avian Dis Lab, Seoul 05029, South Korea

[2] Univ Connecticut, Dept Pathobiol & Vet Sci, Storrs, CT 06269 USA

[3] Kyungpook Natl Univ, Coll Vet Med, Lab Vet Microbiol, Daegu 41566, South Korea

[4] Natl Inst Wildlife Dis Control & Prevent, Wildlife Dis Response Team, Gwangju 62407, South Korea

[5] Natl Inst Wildlife Dis Control & Prevent, Wildlife Dis Res Team, Gwangju 62407, South Korea

来源：

VIRUSES-BASEL | 2020年 / 12卷 / 12期

基金：

新加坡国家研究基金会;

关键词：

highly pathogenic avian influenza virus; wild bird; surveillance; WILD BIRDS; EXPERIMENTAL-INFECTION; A(H5N6) VIRUS; GLOBAL SPREAD; EVOLUTION; SURVEILLANCE; OUTBREAKS; POULTRY; GERMANY;

D O I：

10.3390/v12121389

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

In October 2020, a highly pathogenic avian influenza (HPAI) subtype H5N8 virus was identified from a fecal sample of a wild mandarin duck (Aix galericulata) in South Korea. We sequenced all eight genome segments of the virus, designated as A/Mandarin duck/Korea/K20-551-4/2020(H5N8), and conducted genetic characterization and comparative phylogenetic analysis to track its origin. Genome sequencing and phylogenetic analysis show that the hemagglutinin gene belongs to H5 clade 2.3.4.4 subgroup B. All genes share high levels of nucleotide identity with H5N8 HPAI viruses identified from Europe during early 2020. Enhanced active surveillance in wild and domestic birds is needed to monitor the introduction and spread of HPAI via wild birds and to inform the design of improved prevention and control strategies.

引用

页数：7

共 38 条

[1] A novel reassortant clade 2.3.4.4 highly pathogenic avian influenza H5N6 virus identified in South Korea in 2018 [J].

Baek, Yoon-Gi ;

Lee, Yu-Na ;

Lee, Dong-Hun ;

Cheon, Sun-Ha ;

Kye, Soo-Jeong ;

Park, Yu-Ri ;

Si, Young-Jae ;

Lee, Myoung-Heon ;

Lee, Youn-Jeong .

INFECTION GENETICS AND EVOLUTION, 2020, 78

[2]

Beerens N., 2016, EMERG INFECT DIS, V23, P1974, DOI DOI 10.3201/eid2312.171062

[3] Genesis, Evolution and Prevalence of H5N6 Avian Influenza Viruses in China [J].

Bi, Yuhai ;

Chen, Quanjiao ;

Wang, Qianli ;

Chen, Jianjun ;

Jin, Tao ;

Wong, Gary ;

Quan, Chuansong ;

Liu, Jun ;

Wu, Jun ;

Yin, Renfu ;

Zhao, Lihua ;

Li, Mingxin ;

Ding, Zhuang ;

Zou, Rongrong ;

Xu, Wen ;

Li, Hong ;

Wang, Huijun ;

Tian, Kegong ;

Fu, Guanghua ;

Huang, Yu ;

Shestopalov, Alexander ;

Li, Shoujun ;

Xu, Bing ;

Yu, Hongjie ;

Luo, Tingrong ;

Lu, Lin ;

Xu, Xun ;

Luo, Yang ;

Liu, Yingxia ;

Shi, Weifeng ;

Liu, Di ;

Gao, George Fu .

Cell Host & Microbe, 2016, 20 (06) :810-821

[4]

Donis R. O., 2008, Emerging Infectious Diseases, V14, pe1

[5] Disentangling the role of Africa in the global spread of H5 highly pathogenic avian influenza [J].

Fusaro, Alice ;

Zecchin, Bianca ;

Vrancken, Bram ;

Abolnik, Celia ;

Ademun, Rose ;

Alassane, Abdou ;

Arafa, Abdelsatar ;

Awuni, Joseph Adongo ;

Couacy-Hymann, Emmanuel ;

Coulibaly, M. Betiegue ;

Gaidet, Nicolas ;

Go-Maro, Emilie ;

Joannis, Tony ;

Jumbo, Simon Dickmu ;

Minoungou, Germaine ;

Meseko, Clement ;

Souley, Maman Moutari ;

Ndumu, Deo Birungi ;

Shittu, Ismaila ;

Twabela, Augustin ;

Wade, Abel ;

Wiersma, Lidewij ;

Akpeli, Yao P. ;

Zamperin, Gianpiero ;

Milani, Adelaide ;

Lemey, Philippe ;

Monne, Isabella .

NATURE COMMUNICATIONS, 2019, 10 (1)

[6] Genetic Diversity of Highly Pathogenic Avian Influenza A(H5N8/H5N5) Viruses in Italy, 2016-17 [J].

Fusaro, Alice ;

Monne, Isabella ;

Mulatti, Paolo ;

Zecchin, Bianca ;

Bonfanti, Lebana ;

Ormelli, Silvia ;

Milani, Adelaide ;

Cecchettin, Krizia ;

Lemey, Philippe ;

Moreno, Ana ;

Massi, Paola ;

Dorotea, Tiziano ;

Marangon, Stefano ;

Terregino, Calogero .

EMERGING INFECTIOUS DISEASES, 2017, 23 (09) :1543-1547

[7]

Gu M, 2011, EMERG INFECT DIS, V17, P1060, DOI [10.3201/eid/1706.101406, 10.3201/eid1706.101406]

[8] Universal primer set for the full-length amplification of all influenza A viruses [J].

Hoffmann, E ;

Stech, J ;

Guan, Y ;

Webster, RG ;

Perez, DR .

ARCHIVES OF VIROLOGY, 2001, 146 (12) :2275-2289

[9] Experimental infection of mandarin duck with highly pathogenic avian influenza A (H5N8 and H5N1) viruses [J].

Kang, Hyun-Mi ;

Lee, Eun-Kyoung ;

Song, Byung-Min ;

Heo, Gyeong-Beom ;

Jung, Joojin ;

Jang, Il ;

Bae, You-Chan ;

Jung, Suk Chan ;

Lee, Youn-Jeong .

VETERINARY MICROBIOLOGY, 2017, 198 :59-63

[10] Wild ducks as long-distance vectors of highly pathogenic avian influenza virus (H5NI) [J].

Keawcharoen, Julthatip ;

van Riel, Debby ;

van Amerongen, Geert ;

Bestebroer, Theo ;

Beyer, Walter E. ;

van Lavieren, Rob ;

Osterhaus, Albert D. M. E. ;

Fouchier, Ron A. M. ;

Kuiken, Thijs .

EMERGING INFECTIOUS DISEASES, 2008, 14 (04) :600-607

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