Reaction dynamics studied via femtosecond X-ray liquidography at X-ray free-electron lasers

被引:15
作者
Choi, Eun Hyuk [1 ,2 ,3 ]
Lee, Yunbeom [1 ,2 ,3 ]
Heo, Jun [1 ,2 ,3 ]
Ihee, Hyotcherl [1 ,2 ,3 ]
机构
[1] Korea Adv Inst Sci & Technol KAIST, Dept Chem, Daejeon 34141, South Korea
[2] Korea Adv Inst Sci & Technol KAIST, KI BioCentury, Daejeon 34141, South Korea
[3] Inst Basic Sci IBS, Ctr Adv React Dynam, Daejeon 34141, South Korea
关键词
SOLUTION SCATTERING REVEALS; PROTEIN STRUCTURAL DYNAMICS; SOLVENT-DEPENDENT STRUCTURE; PHOTOACTIVE YELLOW PROTEIN; VIBRATIONAL COHERENCE; SOLVATION DYNAMICS; SYMMETRY-BREAKING; REACTION PATHWAYS; EXCITED-STATE; BOND FORMATION;
D O I
10.1039/d2sc00502f
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
X-ray free-electron lasers (XFELs) provide femtosecond X-ray pulses suitable for pump-probe time-resolved studies with a femtosecond time resolution. Since the advent of the first XFEL in 2009, recent years have witnessed a great number of applications with various pump-probe techniques at XFELs. Among these, time-resolved X-ray liquidography (TRXL) is a powerful method for visualizing structural dynamics in the liquid solution phase. Here, we classify various chemical and biological molecular systems studied via femtosecond TRXL (fs-TRXL) at XFELs, depending on the focus of the studied process, into (i) bond cleavage and formation, (ii) charge distribution and electron transfer, (iii) orientational dynamics, (iv) solvation dynamics, (v) coherent nuclear wavepacket dynamics, and (vi) protein structural dynamics, and provide a brief review on each category. We also lay out a plausible roadmap for future fs-TRXL studies for areas that have not been explored yet.
引用
收藏
页码:8457 / 8490
页数:34
相关论文
共 180 条
  • [81] Optical Kerr Effect of Liquid Acetonitrile Probed by Femtosecond Time-Resolved X-ray Liquidography
    Ki, Hosung
    Choi, Seungjoo
    Kim, Jungmin
    Choi, Eun Hyuk
    Lee, Seonggon
    Lee, Yunbeom
    Yoon, Kihwan
    Ahn, Chi Woo
    Ahn, Doo-Sik
    Lee, Jae Hyuk
    Park, Jaeku
    Eom, Intae
    Kim, Minseok
    Chun, Sae Hwan
    Kim, Joonghan
    Ihee, Hyotcherl
    Kim, Jeongho
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2021, 143 (35) : 14261 - 14273
  • [82] Ultrafast structural dynamics of in-cage isomerization of diiodomethane in solution
    Kim, Hanui
    Kim, Jong Goo
    Kim, Tae Wu
    Lee, Sang Jin
    Nozawa, Shunsuke
    Adachi, Shin-ichi
    Yoon, Kihwan
    Kim, Joonghan
    Ihee, Hyotcherl
    [J]. CHEMICAL SCIENCE, 2021, 12 (06) : 2114 - 2120
  • [83] Effect of Occluded Ligand Migration on the Kinetics and Structural Dynamics of Homodimeric Hemoglobin
    Kim, Hanui
    Kim, Jong Goo
    Muniyappan, Srinivasan
    Kim, Tae Wu
    Lee, Sang Jin
    Ihee, Hyotcherl
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2020, 124 (08) : 1550 - 1556
  • [84] Structural Dynamics of 1,2-Diiodoethane in Cyclohexane Probed by Picosecond X-ray Liquidography
    Kim, Jeongho
    Lee, Jae Hyuk
    Kim, Joonghan
    Jun, Sunhong
    King, Kyung Hwan
    Kim, Tae Wu
    Wulff, Michael
    Ihee, Hyotcherl
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2012, 116 (11) : 2713 - 2722
  • [85] Mapping the emergence of molecular vibrations mediating bond formation
    Kim, Jong Goo
    Nozawa, Shunsuke
    Kim, Hanui
    Choi, Eun Hyuk
    Sato, Tokushi
    Kim, Tae Wu
    Kim, Kyung Hwan
    Ki, Hosung
    Kim, Jungmin
    Choi, Minseo
    Lee, Yunbeom
    Heo, Jun
    Oang, Key Young
    Ichiyanagi, Kouhei
    Fukaya, Ryo
    Lee, Jae Hyuk
    Park, Jaeku
    Eom, Intae
    Chun, Sae Hwan
    Kim, Sunam
    Kim, Minseok
    Katayama, Tetsuo
    Togashi, Tadashi
    Owada, Sigeki
    Yabashi, Makina
    Lee, Sang Jin
    Lee, Seonggon
    Ahn, Chi Woo
    Ahn, Doo-Sik
    Moon, Jiwon
    Choi, Seungjoo
    Kim, Joonghan
    Joo, Taiha
    Kim, Jeongho
    Adachi, Shin-ichi
    Ihee, Hyotcherl
    [J]. NATURE, 2020, 582 (7813) : 520 - +
  • [86] Rotational dephasing of a gold complex probed by anisotropic femtosecond x-ray solution scattering using an x-ray free-electron laser
    Kim, Jong Goo
    Kim, Kyung Hwan
    Oang, Key Young
    Kim, Tae Wu
    Ki, Hosung
    Jo, Junbeom
    Kim, Jeongho
    Sato, Tokushi
    Nozawa, Shunsuke
    Adachi, Shin-ichi
    Ihee, Hyotcherl
    [J]. JOURNAL OF PHYSICS B-ATOMIC MOLECULAR AND OPTICAL PHYSICS, 2015, 48 (24)
  • [87] Protein Structural Dynamics Revealed by Time-Resolved X-ray Solution Scattering
    Kim, Jong Goo
    Kim, Tae Wu
    Kim, Jeongho
    Ihee, Hyotcherl
    [J]. ACCOUNTS OF CHEMICAL RESEARCH, 2015, 48 (08) : 2200 - 2208
  • [88] Solvent-dependent structure of molecular iodine probed by picosecond X-ray solution scattering
    Kim, Kyung Hwan
    Ki, Hosung
    Lee, Jae Hyuk
    Park, Sungjun
    Kong, Qingyu
    Kim, Jeongho
    Kim, Joonghan
    Wulff, Michael
    Ihee, Hyotcherl
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2015, 17 (14) : 8633 - 8637
  • [89] Direct observation of bond formation in solution with femtosecond X-ray scattering
    Kim, Kyung Hwan
    Kim, Jong Goo
    Nozawa, Shunsuke
    Sato, Tokushi
    Oang, Key Young
    Kim, Taewu
    Ki, Hosung
    Jo, Junbeom
    Park, Sungjun
    Song, Changyong
    Sato, Takahiro
    Ogawa, Kanade
    Togashi, Tadashi
    Tono, Kensuke
    Yabashi, Makina
    Ishikawa, Tetsuya
    Kim, Joonghan
    Ryoo, Ryong
    Kim, Jeongho
    Ihee, Hyotcherl
    Adachi, Shin-ichi
    [J]. NATURE, 2015, 518 (7539) : 385 - 389
  • [90] Global Reaction Pathways in the Photodissociation of I3- Ions in Solution at 267 and 400 nm Studied by Picosecond X-ray Liquidography
    Kim, Kyung Hwan
    Ki, Hosung
    Oang, Key Young
    Nozawa, Shunsuke
    Sato, Tokushi
    Kim, Joonghan
    Kim, Tae Kyu
    Kim, Jeongho
    Adachi, Shin-ichi
    Ihee, Hyotcherl
    [J]. CHEMPHYSCHEM, 2013, 14 (16) : 3687 - 3697