Distribution of lifetimes of kinetochore-microtubule attachments: interplay of energy landscape, molecular motors and microtubule (de-)polymerization

被引:5
作者
Sharma, Ajeet K. [1 ]
Shtylla, Blerta [2 ]
Chowdhury, Debashish [1 ,3 ]
机构
[1] Indian Inst Technol, Dept Phys, Kanpur 208016, Uttar Pradesh, India
[2] Ohio State Univ, Math Biosci Inst, Columbus, OH 43210 USA
[3] Max Planck Inst Phys Komplexer Syst, D-01187 Dresden, Germany
关键词
microtubule; kinetochore; molecular motor; first passage time; DIRECTIONAL INSTABILITY; PROTEIN ARCHITECTURE; DROSOPHILA EMBRYOS; CATCH BONDS; FORCE; MECHANISM; MODEL; DEPOLYMERIZATION; CONGRESSION; BIOPHYSICS;
D O I
10.1088/1478-3975/11/3/036004
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Before a cell divides into two daughter cells, chromosomes are replicated resulting in two sister chromosomes embracing each other. Each sister chromosome is bound to a separate proteinous structure, called kinetochore (kt), that captures the tip of a filamentous protein, called microtubule (MT). Two oppositely oriented MTs pull the two kts attached to two sister chromosomes, thereby pulling the two sisters away from each other. Here we theoretically study an even simpler system, namely an isolated kt coupled to a single MT; this system mimics an in vitro experiment where a single kt-MT attachment is reconstituted using purified extracts from budding yeast. Our models not only account for the experimentally observed 'catch-bond-like' behavior of the kt-MT coupling, but also make new predictions on the probability distribution of the lifetimes of the attachments. In principle, our new predictions can be tested by analyzing the data collected in the in vitro experiments, provided that the experiment is repeated a sufficiently large number of times. Our theory provides a deep insight into the effects of (a) size, (b) energetics, and (c) stochastic kinetics of the kt-MT coupling on the distribution of the lifetimes of these attachments.
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页数:13
相关论文
共 53 条
[1]   Tension directly stabilizes reconstituted kinetochore-microtubule attachments [J].
Akiyoshi, Bungo ;
Sarangapani, Krishna K. ;
Powers, Andrew F. ;
Nelson, Christian R. ;
Reichow, Steve L. ;
Arellano-Santoyo, Hugo ;
Gonen, Tamir ;
Ranish, Jeffrey A. ;
Asbury, Charles L. ;
Biggins, Sue .
NATURE, 2010, 468 (7323) :576-U255
[2]   Kinetochores' gripping feat: conformational wave or biased diffusion? [J].
Asbury, Charles L. ;
Tien, Jerry F. ;
Davis, Trisha N. .
TRENDS IN CELL BIOLOGY, 2011, 21 (01) :38-46
[3]  
Balakrishnan V., 2008, ELEMENTS NONEQUILIBR
[4]   Ringing the changes: emerging roles for DASH at the kinetochore-microtubule Interface [J].
Buttrick, Graham J. ;
Millar, Jonathan B. A. .
CHROMOSOME RESEARCH, 2011, 19 (03) :393-407
[5]  
CASSIMERIS L, 1994, J CELL SCI, V107, P285
[6]   Molecular architecture of the kinetochore-microtubule interface [J].
Cheeseman, Iain M. ;
Desai, Arshad .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2008, 9 (01) :33-46
[7]   Stochastic mechano-chemical kinetics of molecular motors: A multidisciplinary enterprise from a physicist's perspective [J].
Chowdhury, Debashish .
PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS, 2013, 529 (01) :1-197
[8]   Modeling Stochastic Kinetics of Molecular Machines at Multiple Levels: From Molecules to Modules [J].
Chowdhury, Debashish .
BIOPHYSICAL JOURNAL, 2013, 104 (11) :2331-2341
[9]   Model of chromosome motility in Drosophila embryos:: Adaptation of a general mechanism for rapid mitosis [J].
Civelekoglu-Scholey, G. ;
Sharp, D. J. ;
Mogilner, A. ;
Scholey, J. M. .
BIOPHYSICAL JOURNAL, 2006, 90 (11) :3966-3982
[10]   Deformations Within Moving Kinetochores Reveal Different Sites of Active and Passive Force Generation [J].
Dumont, Sophie ;
Salmon, E. D. ;
Mitchison, Timothy J. .
SCIENCE, 2012, 337 (6092) :355-358