Solution structure and catalytic mechanism of human protein histidine phosphatase 1

被引:22
作者
Gong, Weibin [1 ,2 ]
Li, Yifei [1 ,2 ]
Cui, Gaofeng [1 ,3 ]
Hu, Jicheng [1 ,2 ]
Fang, Huaming [1 ,2 ]
Jin, Changwen [1 ,2 ,3 ]
Xia, Bin [1 ,2 ,3 ]
机构
[1] Peking Univ, Beijing Nucl Magnet Resonance Ctr, Beijing 100871, Peoples R China
[2] Peking Univ, Coll Life Sci, Beijing 100871, Peoples R China
[3] Peking Univ, Coll Chem & Mol Engn, Beijing 100871, Peoples R China
基金
美国国家科学基金会;
关键词
active site; catalytic mechanism; phosphatase; phosphohistidine; vertebrate; TORSION ANGLE DYNAMICS; PHOSPHOHISTIDINE PHOSPHATASE; TYROSINE-PHOSPHATASE; SECONDARY STRUCTURE; HUMAN ERYTHROCYTES; KINETIC-ANALYSIS; NOE ASSIGNMENT; SUBSTRATE; NMR; PHOSPHORYLATION;
D O I
10.1042/BJ20081571
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein histidine phosphorylation exists widely in vertebrates, and it plays important roles in signal transduction and other cellular functions. However, knowledge about eukaryotic PHPT (protein histidine phosphatase) is still very limited. To date, only one vertebrate PHPT has been discovered,and two crystal structures of hPHPT1 (human PHPT1) have been solved. However, these two structures gave different ligand-binding sites and co-ordination patterns. In the present paper, we have solved the solution structures of hPHPT1 in both P-1-free and P-1-bound states. Through comparison of the structures, along with a mutagenesis study, we have determined the active site of hPHPT1 . In contrast with previous results, Our results indicate that the active site is located between helix alpha 1 and loop L5. His(53) was identified to be the catalytic residue, and the NH groups of residues His(53), Als(54) and Ala(96) and the OH group of Ser(94) should act as anchors of P-1 or substrate by forming H-bonds with P-1. On the basis of our results, a catalytic mechanism is proposed for hPHPT1: the imidazole ring of His(53) serves as it general base to activate it water molecule, and the activated water would attack the substrate as a nucleophile in the catalysis the positively charged side chain of Lys(21) call help stabilize the transition state. No similar catalytic mechanism call be found in the EzCatDB database.
引用
收藏
页码:337 / 344
页数:8
相关论文
共 43 条
[1]   The catalytic domain of the P-type ATPase has the haloacid dehalogenase fold [J].
Aravind, L ;
Galperin, MY ;
Koonin, EV .
TRENDS IN BIOCHEMICAL SCIENCES, 1998, 23 (04) :127-129
[2]   Focus on phosphohistidine [J].
Attwood, P. V. ;
Piggott, M. J. ;
Zu, X. L. ;
Besant, P. G. .
AMINO ACIDS, 2007, 32 (01) :145-156
[3]   EXPRESSION AND BIOCHEMICAL-PROPERTIES OF A PROTEIN-SERINE THREONINE PHOSPHATASE ENCODED BY BACTERIOPHAGE-LAMBDA [J].
BARIK, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (22) :10633-10637
[4]   First structure of a eukaryotic phosphohistidine phosphatase [J].
Busam, Robert D. ;
Thorsell, Ann-Gerd ;
Flores, Alex ;
Hammarstrom, Martin ;
Persson, Camilla ;
Hallberg, B. Martin .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (45) :33830-33834
[5]   Alkaline phosphatase (EC 3.1.3.1) in serum is inhibited by physiological concentrations of inorganic phosphate [J].
Coburn, SP ;
Mahuren, JD ;
Jain, M ;
Zubovic, Y ;
Wortsman, J .
JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 1998, 83 (11) :3951-3957
[6]   Visualization of intermediate and transition-state structures in protein-tyrosine phosphatase catalysis [J].
Denu, JM ;
Lohse, DL ;
Vijayalakshmi, J ;
Saper, MA ;
Dixon, JE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (06) :2493-2498
[7]   SANE (Structure assisted NOE evaluation): An automated model-based approach for NOE assignment [J].
Duggan, BM ;
Legge, GB ;
Dyson, HJ ;
Wright, PE .
JOURNAL OF BIOMOLECULAR NMR, 2001, 19 (04) :321-329
[8]   Identification and characterization of a mammalian 14-kDa phosphohistidine phosphatase [J].
Ek, P ;
Pettersson, G ;
Ek, B ;
Gong, F ;
Li, JP ;
Zetterqvist, Ö .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 2002, 269 (20) :5016-5023
[9]   Kinetic analysis of human serine threonine protein phosphatase 2Cα [J].
Fjeld, CC ;
Denu, JM .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (29) :20336-20343
[10]  
FONDA ML, 1992, J BIOL CHEM, V267, P15978