Cryo-electron tomography: A tool for in situ structural analysis of macromolecular complexes

被引:3
作者
Chung, Jeong Min [1 ]
Jung, Hyun Suk [1 ]
机构
[1] Kangwon Natl Univ, Coll Nat Sci, Dept Biochem, 1 Kangwondaehak Gil, Chuncheon Si 24341, Gangwon Do, South Korea
基金
新加坡国家研究基金会;
关键词
Transmission electron microscopy; cryo-electron microscopy; cryo-electron tomography; direct electron detector; subtomogram averaging; ELECTRON-MICROSCOPY; MOLECULAR ARCHITECTURE; CRYO-EM; HIV-1; BIOLOGY; CELL; RECONSTRUCTION; PROTEASOMES; DETECTORS; PARTICLES;
D O I
10.1080/05704928.2017.1328426
中图分类号
TH7 [仪器、仪表];
学科分类号
0804 ; 080401 ; 081102 ;
摘要
Conventional techniques for structural analysis have intrinsic limitations, including damage or distortion of the functional conformation of a protein complex during purification steps. Recently, a promising electron microscopy technique, cryo-electron tomography (cryo-ET), has been used to obtain insights regarding the molecular assemblies that drive cellular processes. This review focuses on the introduction of the cryo-ET and its recent improvement of resolution, in combination with the development of hardware and software such as direct electron detectors and sub-tomogram averaging techniques. Although cryo-ET still has several challenges, it can provide a glimpse into the interaction and function of macromolecules in their native environment.
引用
收藏
页码:195 / 202
页数:8
相关论文
共 58 条
[1]   The molecular architecture of the nuclear pore complex [J].
Alber, Frank ;
Dokudovskaya, Svetlana ;
Veenhoff, Liesbeth M. ;
Zhang, Wenzhu ;
Kipper, Julia ;
Devos, Damien ;
Suprapto, Adisetyantari ;
Karni-Schmidt, Orit ;
Williams, Rosemary ;
Chait, Brian T. ;
Sali, Andrej ;
Rout, Michael P. .
NATURE, 2007, 450 (7170) :695-701
[2]   In Situ Cryo-Electron Tomography: A Post-Reductionist Approach to Structural Biology [J].
Asano, Shoh ;
Engel, Benjamin D. ;
Baumeister, Wolfgang .
JOURNAL OF MOLECULAR BIOLOGY, 2016, 428 (02) :332-343
[3]   A molecular census of 26S proteasomes in intact neurons [J].
Asano, Shoh ;
Fukuda, Yoshiyuki ;
Beck, Florian ;
Aufderheide, Antje ;
Foerster, Friedrich ;
Danev, Radostin ;
Baumeister, Wolfgang .
SCIENCE, 2015, 347 (6220) :439-442
[4]   How cryo-EM is revolutionizing structural biology [J].
Bai, Xiao-Chen ;
McMullan, Greg ;
Scheres, Sjors H. W. .
TRENDS IN BIOCHEMICAL SCIENCES, 2015, 40 (01) :49-57
[5]   Protein Secondary Structure Determination by Constrained Single-Particle Cryo-Electron Tomography [J].
Bartesaghi, Alberto ;
Lecumberry, Federico ;
Sapiro, Guillermo ;
Subramaniam, Sriram .
STRUCTURE, 2012, 20 (12) :2003-2013
[6]   Collective protein dynamics in relation to function [J].
Berendsen, HJC ;
Hayward, S .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2000, 10 (02) :165-169
[7]   Advances in Single-Particle Electron Cryomicroscopy Structure Determination applied to Sub-tomogram Averaging [J].
Bharat, Tanmay A. M. ;
Russo, Christopher J. ;
Loewe, Jan ;
Passmore, Lori A. ;
Scheres, Sjors H. W. .
STRUCTURE, 2015, 23 (09) :1743-1753
[8]   Toward detecting and identifying macromolecules in a cellular context:: Template matching applied to electron tomograms [J].
Böhm, J ;
Frangakis, AS ;
Hegerl, R ;
Nickell, S ;
Typke, D ;
Baumeister, W .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (26) :14245-14250
[9]   A 9 Å single particle reconstruction from CCD captured images on a 200 kV electron cryomicroscope [J].
Booth, CR ;
Jiang, W ;
Baker, ML ;
Zhou, ZH ;
Ludtke, SJ ;
Chiu, W .
JOURNAL OF STRUCTURAL BIOLOGY, 2004, 147 (02) :116-127
[10]   The Native 3D Organization of Bacterial Polysomes [J].
Brandt, Florian ;
Etchells, Stephanie A. ;
Ortiz, Julio O. ;
Elcock, Adrian H. ;
Hartl, F. Ulrich ;
Baumeister, Wolfgang .
CELL, 2009, 136 (02) :261-271