Protein Structure Refinement Using 13Cα Chemical Shift Tensors

被引:47
|
作者
Wylie, Benjamin J. [1 ]
Schwieters, Charles D. [2 ]
Oldfield, Eric [1 ]
Rienstra, Chad M. [1 ]
机构
[1] Univ Illinois, Dept Chem, Urbana, IL 61801 USA
[2] NIH, Imaging Sci Lab, Ctr Informat Technol, Bethesda, MD 20892 USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
SOLID-STATE NMR; NUCLEAR-MAGNETIC-RESONANCE; INDIVIDUAL CARBON SITES; MAGIC-ANGLE; C-13; NMR; AB-INITIO; MICROCRYSTALLINE PROTEIN; ANTIMICROBIAL PEPTIDE; QUANTUM-CHEMISTRY; ANISOTROPY MEASUREMENTS;
D O I
10.1021/ja804041p
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We have obtained the C-13 alpha chemical shift tensors for each amino acid in the protein GB1. We then developed a CST force field and incorporated this into the Xplor-NIH structure determination program. GB1 structures obtained by using CST restraints had improved precision over those obtained in the absence of CST restraints and were also more accurate. When combined with isotropic chemical shifts, distance, and vector angle restraints, the root-mean squared error with respect to existing X-ray structures was better than similar to 1.0 angstrom. These results are of broad general interest since they show that chemical shift tensors can be used in protein structure refinement, improving both structural accuracy and precision, opening up the way to accurate de novo structure determination.
引用
收藏
页码:985 / 992
页数:8
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