Classification of Multiple Sclerosis Clinical Profiles via Graph Convolutional Neural Networks

被引:45
|
作者
Marzullo, Aldo [1 ,2 ]
Kocevar, Gabriel [1 ]
Stamile, Claudio [1 ]
Durand-Dubief, Francoise [1 ,3 ]
Terracina, Giorgio [2 ]
Calimeri, Francesco [2 ]
Sappey-Marinier, Dominique [1 ,4 ]
机构
[1] Univ Lyon 1, INSA Lyon, Univ Lyon, CREATIS,CNRS UMR5220,INSERM U1206, Villeurbanne, France
[2] Univ Calabria, Dept Math & Comp Sci, Arcavacata Di Rende, Italy
[3] Hosp Civils Lyon, Hop Neurol, Serv Neurol A, Lyon, France
[4] Univ Lyon, CERMEP Imagerie Vivant, Lyon, France
关键词
multiple sclerosis; graph neural networks; graph-derived metrics; diffusion tensor imaging; connectome; NATURAL-HISTORY; MRI; PREDICTORS; DISABILITY; DIAGNOSIS; RELAPSES; DAMAGE;
D O I
10.3389/fnins.2019.00594
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Recent advances in image acquisition and processing techniques, along with the success of novel deep learning architectures, have given the opportunity to develop innovative algorithms capable to provide a better characterization of neurological related diseases. In this work, we introduce a neural network based approach to classify Multiple Sclerosis (MS) patients into four clinical profiles. Starting from their structural connectivity information, obtained by diffusion tensor imaging and represented as a graph, we evaluate the classification performances using unweighted and weighted connectivity matrices. Furthermore, we investigate the role of graph-based features for a better characterization and classification of the pathology. Ninety MS patients (12 clinically isolated syndrome, 30 relapsing-remitting, 28 secondary-progressive, and 20 primary-progressive) along with 24 healthy controls, were considered in this study. This work shows the great performances achieved by neural networks methods in the classification of the clinical profiles. Furthermore, it shows local graph metrics do not improve the classification results suggesting that the latent features created by the neural network in its layers have a much important informative content. Finally, we observe that graph weights representation of brain connections preserve important information to discriminate between clinical forms.
引用
收藏
页数:15
相关论文
共 50 条
  • [21] Graph Neural Networks With Convolutional ARMA Filters
    Bianchi, Filippo Maria
    Grattarola, Daniele
    Livi, Lorenzo
    Alippi, Cesare
    IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2022, 44 (07) : 3496 - 3507
  • [22] Transfer Entropy in Graph Convolutional Neural Networks
    Moldovan, Adrian
    Cataron, Angel
    Andonie, Azvan
    2024 28TH INTERNATIONAL CONFERENCE INFORMATION VISUALISATION, IV 2024, 2024, : 207 - 213
  • [23] FAST GRAPH CONVOLUTIONAL RECURRENT NEURAL NETWORKS
    Kadambari, Sai Kiran
    Chepuri, Sundeep Prabhakar
    CONFERENCE RECORD OF THE 2019 FIFTY-THIRD ASILOMAR CONFERENCE ON SIGNALS, SYSTEMS & COMPUTERS, 2019, : 467 - 471
  • [24] GRAPH-TIME CONVOLUTIONAL NEURAL NETWORKS
    Isufi, Elvin
    Mazzola, Gabriele
    2021 IEEE DATA SCIENCE AND LEARNING WORKSHOP (DSLW), 2021,
  • [25] GRAPH CONVOLUTIONAL NEURAL NETWORKS IN THE COMPANION MODEL
    Shi, John
    Chaudhari, Shreyas
    Moura, Jose M. E.
    2024 IEEE INTERNATIONAL CONFERENCE ON ACOUSTICS, SPEECH AND SIGNAL PROCESSING (ICASSP 2024), 2024, : 7045 - 7049
  • [26] A Graph Based Classification Method for Multiple Sclerosis Clinical Forms Using Support Vector Machine
    Stamile, Claudio
    Kocevar, Gabriel
    Hannoun, Salem
    Durand-Dubief, Francoise
    Sappey-Marinier, Dominique
    MACHINE LEARNING MEETS MEDICAL IMAGING, 2015, 9487 : 57 - 64
  • [27] Automatic detection of lesion load change in Multiple Sclerosis using convolutional neural networks with segmentation confidence
    McKinley, Richard
    Wepfer, Rik
    Grunder, Lorenz
    Aschwanden, Fabian
    Fischer, Tim
    Friedli, Christoph
    Muri, Raphaela
    Rummel, Christian
    Verma, Rajeev
    Weisstanner, Christian
    Wiestler, Benedikt
    Berger, Christoph
    Eichinger, Paul
    Muhlau, Mark
    Reyes, Mauricio
    Salmen, Anke
    Chan, Andrew
    Wiest, Roland
    Wagner, Franca
    NEUROIMAGE-CLINICAL, 2020, 25
  • [28] One-shot domain adaptation in multiple sclerosis lesion segmentation using convolutional neural networks
    Valverde, Sergi
    Salem, Mostafa
    Cabezas, Mariano
    Pareto, Deborah
    Vilanova, Joan C.
    Ramio-Torrenta, Lluis
    Rovira, Alex
    Salvi, Joaquim
    Oliver, Arnau
    Llado, Xavier
    NEUROIMAGE-CLINICAL, 2019, 21
  • [29] Differentiating multiple sclerosis from non-specific white matter changes using a convolutional neural network image classification model
    Amin, Moein
    Nakamura, Kunio
    Ontaneda, Daniel
    MULTIPLE SCLEROSIS AND RELATED DISORDERS, 2024, 82
  • [30] Multiple object tracking based on appearance and motion graph convolutional neural networks with an explainer
    Zhang Y.
    Huang Q.
    Zheng L.
    Neural Computing and Applications, 2024, 36 (22) : 13799 - 13814