How single mutations affect viral escape from broad and narrow antibodies to H1 influenza hemagglutinin

被引:113
作者
Doud, Michael B. [1 ,2 ,3 ]
Lee, Juhye M. [1 ,2 ,3 ]
Bloom, Jesse D. [1 ,2 ]
机构
[1] Fred Hutchinson Canc Res Ctr, Basic Sci & Computat Biol, 1100 Fairview Ave N, Seattle, WA 98109 USA
[2] Univ Washington, Dept Genome Sci, 3720 15th Ave NE, Seattle, WA 98195 USA
[3] Univ Washington, Med Scientist Training Program, 1959 NE Pacific St, Seattle, WA 98195 USA
关键词
RECEPTOR-BINDING SITE; VIRUS HEMAGGLUTININ; ANTIGENIC VARIATION; A VIRUSES; NEUTRALIZING ANTIBODIES; MONOCLONAL-ANTIBODIES; POLIOVIRUS TYPE-1; MEASLES-VIRUS; IN-VIVO; EVOLUTION;
D O I
10.1038/s41467-018-03665-3
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Influenza virus can escape most antibodies with single mutations. However, rare antibodies broadly neutralize many viral strains. It is unclear how easily influenza virus might escape such antibodies if there was strong pressure to do so. Here, we map all single amino-acid mutations that increase resistance to broad antibodies to H1 hemagglutinin. Our approach not only identifies antigenic mutations but also quantifies their effect sizes. All antibodies select mutations, but the effect sizes vary widely. The virus can escape a broad antibody to hemagglutinin's receptor-binding site the same way it escapes narrow strain-specific antibodies: via single mutations with huge effects. In contrast, broad antibodies to hemagglutinin's stalk only select mutations with small effects. Therefore, among the antibodies we examine, breadth is an imperfect indicator of the potential for viral escape via single mutations. Antibodies targeting the H1 hemagglutinin stalk are quantifiably harder to escape than the other antibodies tested here.
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页数:12
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