Solid-state NMR spectroscopy to study protein lipid interactions

被引:41
|
作者
Huster, Daniel [1 ]
机构
[1] Univ Leipzig, Inst Med Phys & Biophys, D-04107 Leipzig, Germany
关键词
Magic-angle spinning; Order parameter; Magnetization transfer; Chemical shift; Dipolar coupling; NUCLEAR-MAGNETIC-RESONANCE; MOLECULAR-DYNAMICS SIMULATIONS; FIELD GRADIENT NMR; LATERAL DIFFUSION; ANTIMICROBIAL PEPTIDE; PHOSPHOLIPID-BILAYERS; BIOLOGICAL-MEMBRANES; CRYSTAL-STRUCTURE; ACYL-CHAIN; NOESY NMR;
D O I
10.1016/j.bbalip.2013.12.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The appropriate lipid environment is crucial for the proper function of membrane proteins. There is a tremendous variety of lipid molecules in the membrane and so far it is often unclear which component of the lipid matrix is essential for the function of a respective protein. Lipid molecules and proteins mutually influence each other; parameters such as acyl chain order, membrane thickness, membrane elasticity, permeability, lipid-domain and annulus formation are strongly modulated by proteins. More recent data also indicates that the influence of proteins goes beyond a single annulus of next-neighbor boundary lipids. Therefore, a mesoscopic approach to membrane lipid-protein interactions in terms of elastic membrane deformations has been developed. Solid-state NMR has greatly contributed to the understanding of lipid-protein interactions and the modern view of biological membranes. Methods that detect the influence of proteins on the membrane as well as direct lipid-protein interactions have been developed and are reviewed here. Examples for solid-state NMR studies on the interaction of Ras proteins, the antimicrobial peptide protegrin-1, the G protein-coupled receptor rhodopsin, and the K+ channel KcsA are discussed. This article is part of a Special Issue entitled Tools to study lipid functions. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:1146 / 1160
页数:15
相关论文
共 50 条
  • [1] Intermolecular Interactions and Protein Dynamics by Solid-State NMR Spectroscopy
    Lamley, Jonathan M.
    Oester, Carl
    Stevens, Rebecca A.
    Lewandowski, Jozef R.
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2015, 54 (51) : 15374 - 15378
  • [2] PROBING LIPID PROTEIN INTERACTIONS BY SOLID-STATE NMR-SPECTROSCOPY OF FAST FROZEN SAMPLES
    LAZO, ND
    HU, W
    CROSS, TA
    JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1992, (20) : 1529 - 1531
  • [3] Toward the characterization of peptidoglycan structure and protein -: Peptidoglycan interactions by solid-state NMR Spectroscopy
    Kern, Thomas
    Hediger, Sabine
    Mueller, Patrick
    Giustini, Cecile
    Joris, Bernard
    Bougault, Catherine
    Vollmer, Waldemar
    Simorre, Jean-Pierre
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2008, 130 (17) : 5618 - +
  • [4] Solid-state NMR spectroscopy
    Paiva, Stacey-Lynn
    NATURE REVIEWS METHODS PRIMERS, 2021, 1 (01):
  • [5] Solid-state NMR spectroscopy
    Bernd Reif
    Sharon E. Ashbrook
    Lyndon Emsley
    Mei Hong
    Nature Reviews Methods Primers, 1
  • [6] Solid-state NMR spectroscopy
    Hodgkinson, Paul
    Wimperis, Stephen
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2009, 11 (32) : 6875 - 6875
  • [7] Solid-state NMR spectroscopy
    Dybowski, Cecil
    Bal, Shi
    ANALYTICAL CHEMISTRY, 2008, 80 (12) : 4295 - 4300
  • [8] Probing Residue-Specific Water-Protein Interactions in Oriented Lipid Membranes via Solid-State NMR Spectroscopy
    Dicke, Alysha
    Gopinath, T.
    Wang, Yingjie
    Veglia, Gianluigi
    JOURNAL OF PHYSICAL CHEMISTRY B, 2016, 120 (42): : 10959 - 10968
  • [9] Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein
    Shenlin Wang
    Rachel A Munro
    Lichi Shi
    Izuru Kawamura
    Takashi Okitsu
    Akimori Wada
    So-Young Kim
    Kwang-Hwan Jung
    Leonid S Brown
    Vladimir Ladizhansky
    Nature Methods, 2013, 10 : 1007 - 1012
  • [10] Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein
    Wang, Shenlin
    Munro, Rachel A.
    Shi, Lichi
    Kawamura, Izuru
    Okitsu, Takashi
    Wada, Akimori
    Kim, So-Young
    Jung, Kwang-Hwan
    Brown, Leonid S.
    Ladizhansky, Vladimir
    NATURE METHODS, 2013, 10 (10) : 1007 - +