ASYMMETRIC, BIMODAL TRADE-OFFS DURING ADAPTATION OF METHYLOBACTERIUM TO DISTINCT GROWTH SUBSTRATES

被引:63
作者
Lee, Ming-Chun [1 ]
Chou, Hsin-Hung [1 ]
Marx, Christopher J. [1 ]
机构
[1] Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA
基金
美国国家科学基金会;
关键词
Experimental evolution; metabolism; methylotrophy; pleiotropy; specialization; TERM EXPERIMENTAL EVOLUTION; GRAM-NEGATIVE BACTERIA; EXTORQUENS AM1; ESCHERICHIA-COLI; FACULTATIVE METHYLOTROPH; BENEFICIAL MUTATIONS; MASS-SPECTROMETRY; ECOLOGICAL SPECIALIZATION; TRANSPOSON MUTAGENESIS; CORRELATED RESPONSES;
D O I
10.1111/j.1558-5646.2009.00757.x
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Trade-offs between selected and nonselected environments are often assumed to exist during adaptation. This phenomenon is prevalent in microbial metabolism, where many organisms have come to specialize on a narrow breadth of substrates. One well-studied example is methylotrophic bacteria that can use single-carbon (C-1) compounds as their sole source of carbon and energy, but generally use few, if any, multi-C compounds. Here, we use adaptation of experimental populations of the model methylotroph, Methylobacterium extorquens AM1, to C-1 (methanol) or multi-C (succinate) compounds to investigate specialization and trade-offs between these two metabolic lifestyles. We found a general trend toward trade-offs during adaptation to succinate, but this was neither universal nor showed a quantitative relationship with the extent of adaptation. After 1500 generations, succinate-evolved strains had a remarkably bimodal distribution of fitness values on methanol: either an improvement comparable to the strains adapted on methanol or the complete loss of the ability to grow on C-1 compounds. In contrast, adaptation to methanol resulted in no such trade-offs. Based on the substantial, asymmetric loss of C-1 growth during growth on succinate, we suggest that the long-term maintenance of C-1 metabolism across the genus Methylobacterium requires relatively frequent use of C-1 compounds to prevent rapid loss.
引用
收藏
页码:2816 / 2830
页数:15
相关论文
共 76 条
[31]   Analysis of gene islands involved in methanopterin-linked C1 transfer reactions reveals new functions and provides evolutionary insights [J].
Kalyuzhnaya, MG ;
Korotkova, N ;
Crowther, G ;
Marx, CJ ;
Lidstrom, ME ;
Chistoserdova, L .
JOURNAL OF BACTERIOLOGY, 2005, 187 (13) :4607-4614
[32]  
Kassen B, 1998, HEREDITY, V80, P732
[33]   The experimental evolution of specialists, generalists, and the maintenance of diversity [J].
Kassen, R .
JOURNAL OF EVOLUTIONARY BIOLOGY, 2002, 15 (02) :173-190
[34]   Local dispersal promotes biodiversity in a real-life game of rock-paper-scissors [J].
Kerr, B ;
Riley, MA ;
Feldman, MW ;
Bohannan, BJM .
NATURE, 2002, 418 (6894) :171-174
[35]   Quantitative metabolome analysis using liquid chromatography-high-resolution mass spectrometry [J].
Kiefer, Patrick ;
Portais, Jean-Charles ;
Vorholt, Julia A. .
ANALYTICAL BIOCHEMISTRY, 2008, 382 (02) :94-100
[36]   Genotype-by-environment interactions influencing the emergence of rpoS mutations in Eschetichia coli populations [J].
King, T ;
Seeto, S ;
Ferenci, T .
GENETICS, 2006, 172 (04) :2071-2079
[37]   Comparison of the proteome of Methylobacterium extorquens AM1 grown under methylotrophic and nonmethylotrophic conditions [J].
Laukel, M ;
Rossignol, M ;
Borderies, G ;
Völker, U ;
Vorholt, JA .
PROTEOMICS, 2004, 4 (05) :1247-1264
[38]   LONG-TERM EXPERIMENTAL EVOLUTION IN ESCHERICHIA-COLI .1. ADAPTATION AND DIVERGENCE DURING 2,000 GENERATIONS [J].
LENSKI, RE ;
ROSE, MR ;
SIMPSON, SC ;
TADLER, SC .
AMERICAN NATURALIST, 1991, 138 (06) :1315-1341
[39]   DYNAMICS OF ADAPTATION AND DIVERSIFICATION - A 10,000-GENERATION EXPERIMENT WITH BACTERIAL-POPULATIONS [J].
LENSKI, RE ;
TRAVISANO, M .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (15) :6808-6814
[40]   EVOLUTION OF PLAGUE VIRULENCE [J].
LENSKI, RE .
NATURE, 1988, 334 (6182) :473-474