Multivariate Multiscale Dispersion Entropy of Biomedical Times Series

被引:72
作者
Azami, Hamed [1 ,2 ,3 ]
Fernandez, Alberto [4 ,5 ,6 ]
Escudero, Javier [1 ]
机构
[1] Univ Edinburgh, Inst Digital Commun, Sch Engn, Kings Bldg, Edinburgh EH9 3FB, Midlothian, Scotland
[2] Harvard Med Sch, Dept Neurol, Charlestown, MA 02129 USA
[3] Harvard Med Sch, Massachusetts Gen Hosp, Charlestown, MA 02129 USA
[4] Univ Complutense Madrid, Dept Psiquiatria & Psicol Med, E-28040 Madrid, Spain
[5] Univ Politecn Madrid, Ctr Tecnol Biomed, Lab Neurociencia Cognit & Computac, E-28040 Madrid, Spain
[6] Univ Complutense Madrid, E-28040 Madrid, Spain
关键词
complexity; multivariate multiscale dispersion entropy; multivariate time series; electroencephalogram; magnetoencephalogram; ALZHEIMERS-DISEASE; PERMUTATION ENTROPY; COMPLEXITY ANALYSIS; HEART-RATE; ELECTROENCEPHALOGRAM; APPROXIMATE; VARIABILITY; RECORDINGS; DYNAMICS; PERIOD;
D O I
10.3390/e21090913
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Due to the non-linearity of numerous physiological recordings, non-linear analysis of multi-channel signals has been extensively used in biomedical engineering and neuroscience. Multivariate multiscale sample entropy (MSE-mvMSE) is a popular non-linear metric to quantify the irregularity of multi-channel time series. However, mvMSE has two main drawbacks: (1) the entropy values obtained by the original algorithm of mvMSE are either undefined or unreliable for short signals (300 sample points); and (2) the computation of mvMSE for signals with a large number of channels requires the storage of a huge number of elements. To deal with these problems and improve the stability of mvMSE, we introduce multivariate multiscale dispersion entropy (MDE-mvMDE), as an extension of our recently developed MDE, to quantify the complexity of multivariate time series. We assess mvMDE, in comparison with the state-of-the-art and most widespread multivariate approaches, namely, mvMSE and multivariate multiscale fuzzy entropy (mvMFE), on multi-channel noise signals, bivariate autoregressive processes, and three biomedical datasets. The results show that mvMDE takes into account dependencies in patterns across both the time and spatial domains. The mvMDE, mvMSE, and mvMFE methods are consistent in that they lead to similar conclusions about the underlying physiological conditions. However, the proposed mvMDE discriminates various physiological states of the biomedical recordings better than mvMSE and mvMFE. In addition, for both the short and long time series, the mvMDE-based results are noticeably more stable than the mvMSE- and mvMFE-based ones. For short multivariate time series, mvMDE, unlike mvMSE, does not result in undefined values. Furthermore, mvMDE is faster than mvMFE and mvMSE and also needs to store a considerably smaller number of elements. Due to its ability to detect different kinds of dynamics of multivariate signals, mvMDE has great potential to analyse various signals.
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页数:21
相关论文
共 52 条
[11]   Permutation entropy: A natural complexity measure for time series [J].
Bandt, C ;
Pompe, B .
PHYSICAL REVIEW LETTERS, 2002, 88 (17) :4
[12]   Admission control in cloud computing using game theory [J].
Baranwal, Gaurav ;
Vidyarthi, Deo Prakash .
JOURNAL OF SUPERCOMPUTING, 2016, 72 (01) :317-346
[13]   Dynamics from multivariate time series [J].
Cao, LY ;
Mees, A ;
Judd, K .
PHYSICA D, 1998, 121 (1-2) :75-88
[14]  
Cerutti S., 2012, PROC 25 IEEE INT S C, P1
[15]   Multiscale, multiorgan and multivariate complexity analyses of cardiovascular regulation [J].
Cerutti, Sergio ;
Hoyer, Dirk ;
Voss, Andreas .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES, 2009, 367 (1892) :1337-1358
[16]   Multiscale entropy analysis of biological signals [J].
Costa, M ;
Goldberger, AL ;
Peng, CK .
PHYSICAL REVIEW E, 2005, 71 (02)
[17]   Uncertainty of data, fuzzy membership functions, and multilayer perceptrons [J].
Duch, W .
IEEE TRANSACTIONS ON NEURAL NETWORKS, 2005, 16 (01) :10-23
[18]   Regional coherence evaluation in mild cognitive impairment and Alzheimer's disease based on adaptively extracted magnetoencephalogram rhythms [J].
Escudero, Javier ;
Sanei, Saeid ;
Jarchi, Delaram ;
Abasolo, Daniel ;
Hornero, Roberto .
PHYSIOLOGICAL MEASUREMENT, 2011, 32 (08) :1163-1180
[19]   Neural Correlates of Phrase Quadrature Perception in Harmonic Rhythm: An EEG Study Using a Brain-Computer Interface [J].
Fernandez-Sotos, Alicia ;
Martinez-Rodrigo, Arturo ;
Moncho-Bogani, Jose ;
Miguel Latorre, Jose ;
Fernandez-Caballero, Antonio .
INTERNATIONAL JOURNAL OF NEURAL SYSTEMS, 2018, 28 (05)
[20]   Refined Multiscale Entropy: Application to 24-h Holter Recordings of Heart Period Variability in Healthy and Aortic Stenosis Subjects [J].
Fernando Valencia, Jose ;
Porta, Alberto ;
Vallverdu, Montserrat ;
Claria, Francesc ;
Baranowski, Rafal ;
Orlowska-Baranowska, Ewa ;
Caminal, Pere .
IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2009, 56 (09) :2202-2213