EASY LEAF AREA: AUTOMATED DIGITAL IMAGE ANALYSIS FOR RAPID AND ACCURATE MEASUREMENT OF LEAF AREA

被引:350
作者
Easlon, Hsien Ming [1 ]
Bloom, Arnold J. [1 ]
机构
[1] Univ Calif Davis, Dept Plant Sci, Davis, CA 95616 USA
来源
APPLICATIONS IN PLANT SCIENCES | 2014年 / 2卷 / 07期
基金
美国国家科学基金会;
关键词
Arabidopsis; digital images; leaf area; !text type='Python']Python[!/text; ARABIDOPSIS-THALIANA;
D O I
10.3732/apps.1400033
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Premise of the study: Measurement of leaf areas from digital photographs has traditionally required significant user input unless backgrounds are carefully masked. Easy Leaf Area was developed to batch process hundreds of Arabidopsis rosette images in minutes, removing background artifacts and saving results to a spreadsheet-ready CSV file. Methods and Results: Easy Leaf Area uses the color ratios of each pixel to distinguish leaves and calibration areas from their background and compares leaf pixel counts to a red calibration area to eliminate the need for camera distance calculations or manual ruler scale measurement that other software methods typically require. Leaf areas estimated by this software from images taken with a camera phone were more accurate than ImageJ estimates from flatbed scanner images. Conclusions: Easy Leaf Area provides an easy-to-use method for rapid measurement of leaf area and nondestructive estimation of canopy area from digital images.
引用
收藏
页数:4
相关论文
共 14 条
  • [11] An inexpensive, accurate method for measuring leaf area and defoliation through digital image analysis
    O'Neal, ME
    Landis, DA
    Isaacs, R
    [J]. JOURNAL OF ECONOMIC ENTOMOLOGY, 2002, 95 (06) : 1190 - 1194
  • [12] A comparative study of salt tolerance parameters in 11 wild relatives of Arabidopsis thaliana
    Orsini, Francesco
    D'Urzo, Matilde Paino
    Inan, Gunsu
    Serra, Sara
    Oh, Dong-Ha
    Mickelbart, Michael V.
    Consiglio, Federica
    Li, Xia
    Jeong, Jae Cheol
    Yun, Dae-Jin
    Bohnert, Hans J.
    Bressan, Ray A.
    Maggio, Albino
    [J]. JOURNAL OF EXPERIMENTAL BOTANY, 2010, 61 (13) : 3787 - 3798
  • [13] NIH Image to ImageJ: 25 years of image analysis
    Schneider, Caroline A.
    Rasband, Wayne S.
    Eliceiri, Kevin W.
    [J]. NATURE METHODS, 2012, 9 (07) : 671 - 675
  • [14] Not so simple after all: searching for ecological advantages of compound leaves
    Warman, Laura
    Moles, Angela T.
    Edwards, Will
    [J]. OIKOS, 2011, 120 (06) : 813 - 821