Non-Coding RNA Transcription and RNA-Directed DNA Methylation in Arabidopsis

被引：23

作者：

He, Xin-Jian ^{[1
]}

Ma, Ze-Yang ^{[1
]}

Liu, Zhang-Wei ^{[1
]}

机构：

[1] Natl Inst Biol Sci, Beijing 102206, Peoples R China

来源：

MOLECULAR PLANT | 2014年 / 7卷 / 09期

关键词：

Pol IV; Pol V; siRNA; DNA methylation; RdDM; transcriptional gene silencing; POLYMERASE-II; POL IV; CYTOSINE METHYLATION; HISTONE METHYLATION; PROCESSING CENTER; MUTANTS REVEALS; PLANT; SIRNA; HETEROCHROMATIN; THALIANA;

D O I：

10.1093/mp/ssu075

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

RNA-directed DNA methylation (RdDM) is responsible for transcriptional silencing of endogenous transposable elements and introduced transgenes. This process requires non-coding RNAs produced by DNA-dependent RNA polymerases IV and V (Pol IV and Pol V). Pol IV-produced non-coding RNAs are precursors of 24-nt small interfering RNAs, whereas Pol V-produced ncRNAs directly act as scaffold RNAs. In this review, we summarize recent advances in the understanding of RdDM. In particular, we focus on the mechanisms underlying the recruitment of Pol IV and Pol V to chromatin and the targeting of RdDM.

引用

页码：1406 / 1414

页数：9

共 50 条

[41] RNA-directed DNA methylation and plant development require an IWR1-type transcription factor
Kanno, Tatsuo
Bucher, Etienne
Daxinger, Lucia
Huettel, Bruno
Kreil, David P.
Breinig, Frank
Lind, Marc
Schmitt, Manfred J.
Simon, Stacey A.
Gurazada, Sai Guna Ranjan
Meyers, Blake C.
Lorkovic, Zdravko J.
Matzke, Antonius J. M.
Matzke, Marjori
EMBO REPORTS, 2010, 11 (01) : 65 - 71
[42] RNA-directed DNA methylation Mechanisms and functions
Mahfouz, Magdy M.
PLANT SIGNALING & BEHAVIOR, 2010, 5 (07) : 806 - 816
[43] RNA-directed DNA methylation and demethylation in plants
CHINNUSAMY Viswanathan
Science China Life Sciences, 2009, (04) : 331 - 343
[44] FVE promotes RNA-directed DNA methylation by facilitating the association of RNA polymerase V with chromatin
Zhou, Jin-Xing
Du, Ping
Liu, Zhang-Wei
Feng, Chao
Cai, Xue-Wei
He, Xin-Jian
PLANT JOURNAL, 2021, 107 (02) : 467 - 479
[45] Interplay among RNA polymerases II, IV and V in RNA-directed DNA methylation at a low copy transgene locus in Arabidopsis thaliana
Wanhui You
Zdravko J. Lorkovic
Antonius J. M. Matzke
Marjori Matzke
Plant Molecular Biology, 2013, 82 : 85 - 96
[46] Interplay among RNA polymerases II, IV and V in RNA-directed DNA methylation at a low copy transgene locus in Arabidopsis thaliana
You, Wanhui
Lorkovic, Zdravko J.
Matzke, Antonius J. M.
Matzke, Marjori
PLANT MOLECULAR BIOLOGY, 2013, 82 (1-2) : 85 - 96
[47] DNA methylation maintenance consolidates RNA-directed DNA methylation and transcriptional gene silencing over generations in Arabidopsis thaliana
Kuhlmann, Markus
Finke, Andreas
Mascher, Martin
Mette, Michael F.
PLANT JOURNAL, 2014, 80 (02) : 269 - 281
[48] Antisilencing role of the RNA-directed DNA methylation pathway and a histone acetyltransferase in Arabidopsis
Li, Xiaojie
Qian, Weiqiang
Zhao, Yusheng
Wang, Chunlei
Shen, Jie
Zhu, Jian-Kang
Gong, Zhizhong
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (28) : 11425 - 11430
[49] Non-coding RNA-directed therapeutics in lung cancer: Delivery technologies and clinical applications
Abdellatif, Ahmed A. H.
Scagnetti, Giulia
Younis, Mahmoud A.
Bouazzaoui, Abdellatif
Tawfeek, Hesham M.
Aldosari, Basmah N.
Almurshedi, Alanood S.
Alsharidah, Mansour
Al Rugaie, Osamah
Davies, Michael P. A.
Liloglou, Triantafillos
Ross, Kehinde
Saleem, Imran
COLLOIDS AND SURFACES B-BIOINTERFACES, 2023, 229
[50] Arabidopsis RNA Polymerase IV generates 21-22 nucleotide small RNAs that can participate in RNA-directed DNA methylation and may regulate genes
Panda, Kaushik
McCue, Andrea D.
Slotkin, R. Keith
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2020, 375 (1795)

← 1 2 3 4 5 →