Activity-Based Protein Profiling Reveals Broad Reactivity of the Nerve Agent Sarin

被引:25
作者
Tuin, Adriaan W. [1 ]
Mol, Marijke A. E. [2 ]
van den Berg, Roland M. [2 ]
Fidder, A. [2 ]
van der Marel, Gijs A. [1 ]
Overkleeft, Herman S. [1 ]
Noort, Daan [2 ]
机构
[1] Leiden Univ, Leiden Inst Chem, Gorlaeus Labs, Leiden, Netherlands
[2] TNO Def Secur & Safety, Business Unit Biol & Chem Protect, NL-2280 AA Rijswijk, Netherlands
关键词
S-FORMYLGLUTATHIONE HYDROLASE; CRYSTAL-STRUCTURES; ORGANOPHOSPHORUS TOXICANTS; ACETYLCHOLINESTERASE; MECHANISM; TOXICITY; SPECIFICITY; EXPOSURE; COMPLEX; TARGETS;
D O I
10.1021/tx8004218
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Elucidation of noncholinesterase protein targets of organophosphates, and nerve agents in particular, may reveal additional mechanisms for their high toxicity as well as clues for novel therapeutic approaches toward intoxications with these agents. Within this framework, we here describe the synthesis of the activity-based probe 3, which contains a phosphonofluoridate moiety, a P-Me moiety, and a biotinylated O-alkyl group, and its use in activity-based protein profiling with two relevant biological samples, that is, rhesus monkey liver and cultured human A549 lung cells. In this way, we have unearthed eight serine hydrolases (fatty acid synthase, acylpeptide hydrolase, dipeptidyl peptidase 9, prolyl oligopeptidase, carboxylesterase, long-chain acyl coenzyme A thioesterase, PAF acetylhydrolase 1b, and esterase D/S-formyl glutathione hydrolase) as targets that are modified by the nerve agent sarin. It is also shown that the newly developed probe 3 might find its way into the development of alternative, less laborious purification protocols for human butyrylcholinesterase, a potent bioscavenger currently under clinical investigation as a prophylactic/therapeutic for nerve agent intoxications.
引用
收藏
页码:683 / 689
页数:7
相关论文
共 50 条
[41]   Digestive proteolysis in the Colorado potato beetle, Leptinotarsa decemlineata: Activity-based profiling and imaging of a multipeptidase network [J].
Srp, Jaroslav ;
Nussbaumerova, Martina ;
Horn, Martin ;
Mares, Michael .
INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY, 2016, 78 :1-11
[42]   Development of a 1,2-difluorofucoside activity-based probe for profiling GH29 fucosidases [J].
Luijkx, Yvette M. C. A. ;
Jongkees, Seino ;
Strijbis, Karin ;
Wennekes, Tom .
ORGANIC & BIOMOLECULAR CHEMISTRY, 2021, 19 (13) :2968-2977
[43]   Thioether-mediated protein ubiquitination in constructing affinity- and activity-based ubiquitinated protein probes [J].
Davidson, Gregory A. ;
Moafian, Zeinab ;
Sensi, Amanda R. ;
Zhuang, Zhihao .
NATURE PROTOCOLS, 2025,
[44]   Development of Activity-Based Probes for Ubiquitin and Ubiquitin-like Protein Signaling Pathways [J].
An, Heeseon ;
Statsyuk, Alexander V. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (45) :16948-16962
[45]   Development of a Selective Activity-Based Probe for Adenylating Enzymes: Profiling MbtA Involved in Siderophore Biosynthesis from Mycobacterium tuberculosis [J].
Duckworth, Benjamin P. ;
Wilson, Daniel J. ;
Nelson, Kathryn M. ;
Boshoff, Helena I. ;
Barry, Clifton E., III ;
Aldrich, Courtney C. .
ACS CHEMICAL BIOLOGY, 2012, 7 (10) :1653-1658
[46]   Activity-Based Proteome Profiling of Hepatoma Cells during Hepatitis C Virus Replication Using Protease Substrate Probes [J].
Blais, David R. ;
Brulotte, Marc ;
Qian, Yiming ;
Belanger, Sylvie ;
Yao, Shao Q. ;
Pezacki, John Paul .
JOURNAL OF PROTEOME RESEARCH, 2010, 9 (02) :912-923
[47]   Mutation Analysis of the Presenilin 1 N-terminal Domain Reveals a Broad Spectrum of γ-Secretase Activity toward Amyloid Precursor Protein and Other Substrates [J].
Gong, Ping ;
Vetrivel, Kulandaivelu S. ;
Nguyen, Phuong D. ;
Meckler, Xavier ;
Cheng, Haipeng ;
Kounnas, Maria Z. ;
Wagner, Steven L. ;
Parent, Angeele T. ;
Thinakaran, Gopal .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2010, 285 (49) :38042-38052
[48]   Quantitative Profiling of the Activity of Protein Lysine Methyltransferase SMYD2 Using SILAC-Based Proteomics [J].
Olsen, Jonathan B. ;
Cao, Xing-Jun ;
Han, Bomie ;
Chen, Lisa Hong ;
Horvath, Alexander ;
Richardson, Timothy I. ;
Campbell, Robert M. ;
Garcia, Benjamin A. ;
Nguyen, Hannah .
MOLECULAR & CELLULAR PROTEOMICS, 2016, 15 (03) :892-905
[49]   Cyclodextrin-based formulations for delivering broad-spectrum nerve agent antidote to the central nervous system: stability, physicochemical characterization and application in a human blood-brain barrier model [J].
Thiberville, Lea ;
Faivre, Vincent ;
Sizun, Christina ;
Dehouck, Marie-Pierre ;
Landry, Christophe ;
Baati, Rachid ;
Tsapis, Nicolas .
INTERNATIONAL JOURNAL OF PHARMACEUTICS, 2025, 674
[50]   A Mass Spectrometry-Based Profiling of Interactomes of Viral DDB1-and Cullin Ubiquitin Ligase-Binding Proteins Reveals NF-κB Inhibitory Activity of the HIV-2-Encoded Vpx [J].
Landsberg, Christine D. ;
Megger, Dominik A. ;
Hotter, Dominik ;
Rueckborn, Meike U. ;
Eilbrecht, Mareike ;
Rashidi-Alavijeh, Jassin ;
Howe, Sebastian ;
Heinrichs, Stefan ;
Sauter, Daniel ;
Sitek, Barbara ;
Vu Thuy Khanh Le-Trilling ;
Trilling, Mirko .
FRONTIERS IN IMMUNOLOGY, 2018, 9