Activity-Based Protein Profiling Reveals Broad Reactivity of the Nerve Agent Sarin

被引:25
作者
Tuin, Adriaan W. [1 ]
Mol, Marijke A. E. [2 ]
van den Berg, Roland M. [2 ]
Fidder, A. [2 ]
van der Marel, Gijs A. [1 ]
Overkleeft, Herman S. [1 ]
Noort, Daan [2 ]
机构
[1] Leiden Univ, Leiden Inst Chem, Gorlaeus Labs, Leiden, Netherlands
[2] TNO Def Secur & Safety, Business Unit Biol & Chem Protect, NL-2280 AA Rijswijk, Netherlands
关键词
S-FORMYLGLUTATHIONE HYDROLASE; CRYSTAL-STRUCTURES; ORGANOPHOSPHORUS TOXICANTS; ACETYLCHOLINESTERASE; MECHANISM; TOXICITY; SPECIFICITY; EXPOSURE; COMPLEX; TARGETS;
D O I
10.1021/tx8004218
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Elucidation of noncholinesterase protein targets of organophosphates, and nerve agents in particular, may reveal additional mechanisms for their high toxicity as well as clues for novel therapeutic approaches toward intoxications with these agents. Within this framework, we here describe the synthesis of the activity-based probe 3, which contains a phosphonofluoridate moiety, a P-Me moiety, and a biotinylated O-alkyl group, and its use in activity-based protein profiling with two relevant biological samples, that is, rhesus monkey liver and cultured human A549 lung cells. In this way, we have unearthed eight serine hydrolases (fatty acid synthase, acylpeptide hydrolase, dipeptidyl peptidase 9, prolyl oligopeptidase, carboxylesterase, long-chain acyl coenzyme A thioesterase, PAF acetylhydrolase 1b, and esterase D/S-formyl glutathione hydrolase) as targets that are modified by the nerve agent sarin. It is also shown that the newly developed probe 3 might find its way into the development of alternative, less laborious purification protocols for human butyrylcholinesterase, a potent bioscavenger currently under clinical investigation as a prophylactic/therapeutic for nerve agent intoxications.
引用
收藏
页码:683 / 689
页数:7
相关论文
共 50 条
[11]   Understanding and Targeting the Endocannabinoid System with Activity-Based Protein Profiling [J].
Zhu, Na ;
Janssen, Antonius P. A. ;
van der Stelt, Mario .
ISRAEL JOURNAL OF CHEMISTRY, 2023, 63 (3-4)
[12]   Activity-Based Protein Profiling of Organophosphorus and Thiocarbamate Pesticides Reveals Multiple Serine Hydrolase Targets in Mouse Brain [J].
Nomura, Daniel K. ;
Casida, John E. .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2011, 59 (07) :2808-2815
[13]   Site-Specific Activity-Based Protein Profiling Using Phosphonate Handles [J].
van Bergen, Wouter ;
Hevler, Johannes F. ;
Wu, Wei ;
Baggelaar, Marc P. ;
Heck, Albert J. R. .
MOLECULAR & CELLULAR PROTEOMICS, 2023, 22 (01)
[14]   Target identification of covalently binding drugs by activity-based protein profiling (ABPP) [J].
Pichler, Christian M. ;
Krysiak, Joanna ;
Breinbauer, Rolf .
BIOORGANIC & MEDICINAL CHEMISTRY, 2016, 24 (15) :3291-3303
[15]   Activity-Based Hydrazine Probes for Protein Profiling of Electrophilic Functionality in Therapeutic Targets [J].
Lin, Zongtao ;
Wang, Xie ;
Bustin, Katelyn A. ;
Shishikura, Kyosuke ;
McKnight, Nate R. ;
He, Lin ;
Suciu, Radu M. ;
Hu, Kai ;
Han, Xian ;
Ahmadi, Mina ;
Olson, Erika J. ;
Parsons, William H. ;
Matthews, Megan L. .
ACS CENTRAL SCIENCE, 2021, 7 (09) :1524-1534
[16]   Relative quantification of proteasome activity by activity-based protein profiling and LC-MS/MS [J].
Li, Nan ;
Kuo, Chi-Lin ;
Paniagua, Guillem ;
van den Elst, Hans ;
Verdoes, Martijn ;
Willems, Lianne I. ;
van der Linden, Wouter A. ;
Ruben, Mark ;
van Genderen, Eric ;
Gubbens, Jacob ;
van Wezel, Gilles P. ;
Overkleeft, Herman S. ;
Florea, Bogdan I. .
NATURE PROTOCOLS, 2013, 8 (06) :1155-1168
[17]   Activity-Based Protein Profiling of the Escherichia coli GlpG Rhomboid Protein Delineates the Catalytic Core [J].
Sherratt, Allison R. ;
Blais, David R. ;
Ghasriani, Houman ;
Pezacki, John Paul ;
Goto, Natalie K. .
BIOCHEMISTRY, 2012, 51 (39) :7794-7803
[18]   Activity-based protein profiling as a robust method for enzyme identification and screening in extremophilic Archaea [J].
Zweerink, Susanne ;
Kallnik, Verena ;
Ninck, Sabrina ;
Nickel, Sabrina ;
Verheyen, Julia ;
Blum, Marcel ;
Wagner, Alexander ;
Feldmann, Ingo ;
Sickmann, Albert ;
Albers, Sonja-Verena ;
Braesen, Christopher ;
Kaschani, Farnusch ;
Siebers, Bettina ;
Kaiser, Markus .
NATURE COMMUNICATIONS, 2017, 8
[19]   Activity-Based Profiling of Retaining β-Glucosidases: A Comparative Study [J].
Witte, Martin D. ;
Walvoort, Marthe T. C. ;
Li, Kah-Yee ;
Kallemeijn, Wouter W. ;
Donker-Koopman, Wilma E. ;
Boot, Rolf G. ;
Aerts, Johannes M. F. G. ;
Codee, Jeroen D. C. ;
van der Marel, Gijsbert A. ;
Overkleeft, Herman S. .
CHEMBIOCHEM, 2011, 12 (08) :1263-1269
[20]   (Glycan Binding) Activity-Based Protein Profiling in Cells Enabled by Mass Spectrometry-Based Proteomics [J].
Vilen, Zak ;
Reeves, Abigail E. ;
Huang, Mia L. .
ISRAEL JOURNAL OF CHEMISTRY, 2023, 63 (3-4)