Graphical interface for automated management of motion artifact within fMRI acquisitions: INFOBAR

被引：7

作者：

Anand, Manish ^{[1
]}

Diekfuss, Jed A. ^{[1
,9
,10
]}

Slutsky-Ganesh, Alexis B. ^{[2
]}

Bonnette, Scott ^{[1
]}

Grooms, Dustin R. ^{[3
,4
,5
]}

Myer, Gregory D. ^{[1
,6
,7
,8
,9
,10
]}

机构：

[1] Cincinnati Childrens Hosp Med Ctr, Div Sports Med, SPORT Ctr, Cincinnati, OH 45229 USA

[2] Univ North Carolina Greensboro, Dept Kinesiol, Greensboro, NC USA

[3] Ohio Univ, Ohio Musculoskeletal & Neurol Inst, Athens, OH 45701 USA

[4] Ohio Univ, Coll Hlth Sci & Profess, Sch Appl Hlth Sci & Wellness, Div Athlet Training, Athens, OH 45701 USA

[5] Ohio Univ, Coll Hlth Sci & Profess, Sch Rehabil & Commun Sci, Div Phys Therapy, Athens, OH 45701 USA

[6] Univ Cincinnati, Coll Med, Dept Pediat & Orthopaed Surg, Cincinnati, OH USA

[7] Micheli Ctr Sports Injury Prevent, Waltham, MA USA

[8] Emory Sports Med Ctr, Atlanta, GA USA

[9] Emory Sport Performance & Res Ctr, Flowery Branch, GA USA

[10] Emory Univ, Sch Med, Dept Orthopaed, Atlanta, GA USA

来源：

SOFTWAREX | 2020年 / 12卷

基金：

美国国家卫生研究院;

关键词：

ICA-AROMA; GUI; Batch process; !text type='Python']Python[!/text; INDEPENDENT COMPONENT ANALYSIS; BRAIN ACTIVITY; ICA-AROMA; STRATEGIES; KNEE;

D O I：

10.1016/j.softx.2020.100598

中图分类号：

TP31 [计算机软件];

学科分类号：

081202 ; 0835 ;

摘要：

Independent Component Analysis-based Automatic Removal of Motion Artifacts (ICA-AROMA; Pruim et al., 2015) is a robust approach to remove brain activity related to head motion within functional magnetic resonance imaging (fMRI) datasets. However, ICA-AROMA requires command line implementation and customized code to batch process large datasets. We developed a cross-platform, open-source graphical user Interface for Batch processing fMRI datasets using ICA-AROMA (INFOBAR). INFOBAR allows a user to search directories, identify appropriate datasets, and batch execute ICA-AROMA. INFOBAR also has additional data processing options and visualization features to support all researchers interested in mitigating head motion artifact in post-processing using ICA-AROMA. (C) 2020 The Authors. Published by Elsevier B.V.

引用

页数：6

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