Kinetic metabolic modelling for the control of plant cells cytoplasmic phosphate

被引:17
作者
Cloutier, Mathieu [1 ]
Chen, Jingkui [1 ]
Tatge, Frithjof [1 ]
McMurray-Beaulieu, Virginie [1 ]
Perrier, Michel [1 ]
Jolicoeur, Mario [1 ]
机构
[1] Ecole Polytech, Canada Res Chair Appl Metab Engn, Dept Chem Engn, Bio P2 Res Unit, Montreal, PQ H3C 3A7, Canada
关键词
Dynamic metabolic modelling; Metabolic regulation; Phosphate metabolism; Plant cell culture; HAIRY ROOTS; STARVATION; EXPRESSION; INDUCTION; FLUXES; GROWTH; STATE; CYCLE; C-13; NMR;
D O I
10.1016/j.jtbi.2009.02.022
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
A previously developed kinetic metabolic model for plant metabolism was used in a context of identification and control of intracellular phosphate (Pi) dynamics. Experimental data from batch flask cultures of Eschscholtiza californica cells was used to calibrate the model parameters for the slow dynamics (growth, nutrition, anabolic pathways, etc.). Perturbation experiments were performed using a perfusion small-scale bioreactor monitored by in vivo P-31 NMR. Parameter identification for Pi metabolism was done by measuring the cells dynamic response to different inputs for extracellular Pi (two pulse-response experiments and a step-response experiment). The calibrated model can describe Pi translocation between the cellular pools (vacuole and cytoplasm). The effect of intracellular Pi management on ATP/ADP and phosphomonoesters concentrations is also described by the model. The calibrated model is then used to develop a control strategy on the cytoplasmic Pi pool. From the identification of the systems dynamics, a proportional-integral controller was designed and tuned. The closed-loop control was implemented in the small-scale NMR bioreactor and experimental results were in accordance with model predictions. Thus, the calibrated model is able to predict cellular behaviour for phosphate metabolism and it was demonstrated that it is possible to control the intracellular level of cytoplasmic Pi in plant cells. (C) 2009 Elsevier Ltd. All rights reserved.
引用
收藏
页码:118 / 131
页数:14
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