Reproducible RNA-seq analysis using recount2

被引:233
作者
Collado-Torres, Leonardo [1 ,2 ,3 ]
Nellore, Abhinav [4 ,5 ,6 ]
Kammers, Kai [1 ,2 ,7 ]
Ellis, Shannon E. [1 ,2 ]
Taub, Margaret A. [1 ,2 ]
Hansen, Kasper D. [1 ,2 ,8 ]
Jaffe, Andrew E. [1 ,2 ,3 ,9 ]
Langmead, Ben [1 ,2 ,10 ]
Leek, Jeffrey T. [1 ,2 ]
机构
[1] Johns Hopkins Bloomberg Sch Publ Hlth, Dept Biostat, Baltimore, MD 21205 USA
[2] Johns Hopkins Univ, Ctr Computat Biol, Baltimore, MD 21218 USA
[3] Lieber Inst Brain Dev, Johns Hopkins Med Campus, Baltimore, MD 21205 USA
[4] Oregon Hlth & Sci Univ, Dept Biomed Engn, Portland, OR 97201 USA
[5] Oregon Hlth & Sci Univ, Dept Surg, Portland, OR 97201 USA
[6] Oregon Hlth & Sci Univ, Computat Biol Program, Portland, OR 97201 USA
[7] Johns Hopkins Univ, Sch Med, Dept Oncol, Div Biostat & Bioinformat,Sidney Kimmel Comprehen, Baltimore, MD 21205 USA
[8] Johns Hopkins Univ, McKusick Nathans Inst Genet Med, Baltimore, MD USA
[9] Johns Hopkins Univ, Dept Mental Hlth, Baltimore, MD 21218 USA
[10] Johns Hopkins Univ, Dept Comp Sci, Baltimore, MD 21218 USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
GENE-EXPRESSION; TRANSCRIPTOME; ABUNDANCE; ALIGNMENT; CLOUD;
D O I
10.1038/nbt.3838
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
引用
收藏
页码:319 / 321
页数:4
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