To BAC or not to BAC:: marine ecogenomics

被引：42
作者：
Béjà, O [1 ]
机构：
[1] Technion Israel Inst Technol, Dept Biol, IL-32000 Haifa, Israel
来源：
CURRENT OPINION IN BIOTECHNOLOGY | 2004年 / 15卷 / 03期
关键词：
D O I：
10.1016/j.copbio.2004.03.005
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
Most microbes in the ocean are still resistant to our collective cultivation efforts. Environmental microbial genomics provides science with the means for accessing and assessing the genomes, diversity, evolution and population dynamics of uncultured microorganisms - the ocean's hidden majority.
引用
收藏
页码：187 / 190
页数：4
相关论文
共 38 条
[1]   Unsuspected diversity among marine aerobic anoxygenic phototrophs [J].
Béjà, O ;
Suzuki, MT ;
Heidelberg, JF ;
Nelson, WC ;
Preston, CM ;
Hamada, T ;
Eisen, JA ;
Fraser, CM ;
DeLong, EF .
NATURE, 2002, 415 (6872) :630-633
[2]   Bacterial rhodopsin:: Evidence for a new type of phototrophy in the sea [J].
Béjà, O ;
Aravind, L ;
Koonin, EV ;
Suzuki, MT ;
Hadd, A ;
Nguyen, LP ;
Jovanovich, S ;
Gates, CM ;
Feldman, RA ;
Spudich, JL ;
Spudich, EN ;
DeLong, EF .
SCIENCE, 2000, 289 (5486) :1902-1906
[3]   Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces [J].
Béjà, O ;
Koonin, EV ;
Aravind, L ;
Taylor, LT ;
Seitz, H ;
Stein, JL ;
Bensen, DC ;
Feldman, RA ;
Swanson, RV ;
DeLong, EF .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2002, 68 (01) :335-345
[4]   Proteorhodopsin phototrophy in the ocean [J].
Béjà, O ;
Spudich, EN ;
Spudich, JL ;
Leclerc, M ;
DeLong, EF .
NATURE, 2001, 411 (6839) :786-789
[5]   Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage [J].
Béjà, O ;
Suzuki, MT ;
Koonin, EV ;
Aravind, L ;
Hadd, A ;
Nguyen, LP ;
Villacorta, R ;
Amjadi, M ;
Garrigues, C ;
Jovanovich, SB ;
Feldman, RA ;
DeLong, EF .
ENVIRONMENTAL MICROBIOLOGY, 2000, 2 (05) :516-529
[6]   Evidence of chemolithoautotrophy in the bacterial community associated with Alvinella pompejana, a hydrothermal vent polychaete [J].
Campbell, BJ ;
Stein, JL ;
Cary, SC .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (09) :5070-5078
[7]   High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates [J].
Connon, SA ;
Giovannoni, SJ .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2002, 68 (08) :3878-3885
[8]   Proteorhodopsin genes are distributed among divergent marine bacterial taxa [J].
de la Torre, JR ;
Christianson, LM ;
Béjà, O ;
Suzuki, MT ;
Karl, DM ;
Heidelberg, J ;
DeLong, EF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (22) :12830-12835
[9]   Microbiology - Resolving a methane mystery [J].
DeLong, EF .
NATURE, 2000, 407 (6804) :577-579
[10]   Shotgun sequencing in the sea: A blast from the past? [J].
Falkowski, PG ;
de Vargas, C .
SCIENCE, 2004, 304 (5667) :58-60
1234