Recognizing patterns of visual field loss using unsupervised machine learning

被引:14
作者
Yousefi, Siamak [1 ]
Goldbaum, Michael H. [1 ]
Zangwill, Linda M. [1 ]
Medeiros, Felipe A. [1 ]
Bowd, Christopher [1 ]
机构
[1] Univ Calif San Diego, Dept Ophthalmol, Hamilton Glaucoma Ctr, La Jolla, CA 92093 USA
来源
MEDICAL IMAGING 2014: IMAGE PROCESSING | 2014年 / 9034卷
关键词
machine learning; unsupervised clustering; pattern recognition; glaucoma; visual field loss; INDEPENDENT COMPONENT ANALYSIS; DOUBLING TECHNOLOGY PERIMETRY; AUTOMATED PERIMETRY; IDENTIFY PATTERNS; GLAUCOMA; DIAGNOSIS; PROGRESSION; DEFECTS; MIXTURE;
D O I
10.1117/12.2043145
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
Glaucoma is a potentially blinding optic neuropathy that results in a decrease in visual sensitivity. Visual field abnormalities (decreased visual sensitivity on psychophysical tests) are the primary means of glaucoma diagnosis. One form of visual field testing is Frequency Doubling Technology (FDT) that tests sensitivity at 52 points within the visual field. Like other psychophysical tests used in clinical practice, FDT results yield specific patterns of defect indicative of the disease. We used Gaussian Mixture Model with Expectation Maximization (GEM), (EM is used to estimate the model parameters) to automatically separate FDT data into clusters of normal and abnormal eyes. Principal component analysis (PCA) was used to decompose each cluster into different axes (patterns). FDT measurements were obtained from 1,190 eyes with normal FDT results and 786 eyes with abnormal (i.e., glaucomatous) FDT results, recruited from a university-based, longitudinal, multi-center, clinical study on glaucoma. The GEM input was the 52-point FDT threshold sensitivities for all eyes. The optimal GEM model separated the FDT fields into 3 clusters. Cluster 1 contained 94% normal fields (94% specificity) and clusters 2 and 3 combined, contained 77% abnormal fields (77% sensitivity). For clusters 1, 2 and 3 the optimal number of PCA-identified axes were 2, 2 and 5, respectively. GEM with PCA successfully separated FDT fields from healthy and glaucoma eyes and identified familiar glaucomatous patterns of loss.
引用
收藏
页数:10
相关论文
共 32 条
[1]   Automated Diagnosis of Glaucoma Using Texture and Higher Order Spectra Features [J].
Acharya, U. Rajendra ;
Dua, Sumeet ;
Du, Xian ;
Sree, Vinitha S. ;
Chua, Chua Kuang .
IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE, 2011, 15 (03) :449-455
[2]   The role of standard automated perimetry and newer functional methods for glaucoma diagnosis and follow-up [J].
Alencar, Luciana M. ;
Medeiros, Felipe A. .
INDIAN JOURNAL OF OPHTHALMOLOGY, 2011, 59 :S53-S58
[3]  
[Anonymous], 2000, WILEY SERIES PROBABI
[4]  
[Anonymous], IASTED INT C SIGN IM
[5]  
[Anonymous], IEEE T BIOM IN PRESS
[6]  
[Anonymous], PLOS ONE IN PRESS
[7]  
Armaly M F, 1971, Trans Am Ophthalmol Soc, V69, P147
[8]  
DRANCE SM, 1969, INVEST OPHTH VISUAL, V8, P84
[9]   Unsupervised learning of finite mixture models [J].
Figueiredo, MAT ;
Jain, AK .
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2002, 24 (03) :381-396
[10]   Using unsupervised learning with independent component analysis to identify patterns of glaucomatous visual field defects [J].
Goldbaum, MH ;
Sample, PA ;
Zhang, ZH ;
Chan, KL ;
Hao, JC ;
Lee, TW ;
Boden, C ;
Bowd, C ;
Bourne, R ;
Zangwill, L ;
Sejnowski, T ;
Spinak, D ;
Weinreb, RN .
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2005, 46 (10) :3676-3683