Development of an improved RT-LAMP assay for detection of currently circulating rubella viruses

被引:8
|
作者
Abo, H. [1 ]
Okamoto, K. [1 ]
Anraku, M. [1 ]
Otsuki, N. [1 ]
Sakata, M. [1 ]
Icenogle, J. [2 ]
Zheng, Q. [2 ]
Kurata, T. [3 ]
Kase, T. [3 ]
Komase, K. [1 ]
Takeda, M. [1 ]
Mori, Y. [1 ]
机构
[1] Natl Inst Infect Dis, Lab Rubella, Dept Virol 3, Murayama Branch, Tokyo 2080011, Japan
[2] Ctr Dis Control & Prevent, Measles Mumps Rubella & Herpes Virus Lab Branch, Div Viral Dis, Atlanta, GA 30333 USA
[3] Osaka Prefectural Inst Publ Hlth, Div Virol, Dept Infect Dis, Higashinari Ku, Osaka 5370025, Japan
关键词
Rubella; Diagnosis; RT-LAMP; MEDIATED ISOTHERMAL AMPLIFICATION; RAPID DETECTION; DIAGNOSIS; GENOME; RNA;
D O I
10.1016/j.jviromet.2014.06.013
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Rubella virus is the causative agent of rubella. The symptoms are usually mild, and characterized by a maculopapular rash and fever. However, rubella infection in pregnant women sometimes can result in the birth of infants with congenital rubella syndrome (CRS). Global efforts have been made to reduce and eliminate CRS. Although a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for detection of rubella virus has been reported, the primers contained several mismatched nucleotides with the genomes of currently circulating rubella virus strains. In the present study, a new RT-LAMP assay was established. The detection limit of this assay was 100-1000 PFU/reaction of viruses for all rubella genotypes, except for genotype 2C, which is not commonly found in the current era. Therefore, the new RI-LAMP assay can successfully detect all current rubella virus genotypes, and does not require sophisticated devices like TaqMan real-time PCR systems. This assay should be a useful assay for laboratory diagnosis of rubella and CRS. (C) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:73 / 77
页数:5
相关论文
共 50 条
  • [21] Rapid and Reliable Detection of SARS-CoV-2 Using Direct RT-LAMP
    El-Kafrawy, Sherif A.
    El-Daly, Mai M.
    Hassan, Ahmed M.
    Harakeh, Steve M.
    Alandijany, Thamir A.
    Azhar, Esam, I
    DIAGNOSTICS, 2022, 12 (04)
  • [22] Development of a single-tube one-step RT-LAMP assay to detect the Chikungunya virus genome
    Lopez-Jimena, Benjamin
    Wehner, Stefanie
    Harold, Graham
    Bakheit, Mohammed
    Frischmann, Sieghard
    Bekaert, Michael
    Faye, Oumar
    Sall, Amadou Alpha
    Weidmann, Manfred
    PLOS NEGLECTED TROPICAL DISEASES, 2018, 12 (05):
  • [23] Development of a colorimetric RT-LAMP assay for the detection of SARS-COV-2 isolated from Oman
    Ali, Haytham
    Alkhaursi, Khaddia
    Holton, Timothy
    JOURNAL OF INFECTION IN DEVELOPING COUNTRIES, 2022, 16 (06): : 952 - 958
  • [24] An alternative colorimetric RT-LAMP assay for the rapid detection of SARSCoV-2: development and validation in Thailand
    Klayut, Wiphat
    Wongchai, Thanee
    Chuenchom, Nattagarn
    Bhakdeenuan, Payu
    Bunchoo, Supranee
    Srisungngam, Sopa
    Suphankong, Sirilada
    Phetsuksiri, Benjawan
    Uppapong, Ballang
    Rudeeaneksin, Janisara
    JOURNAL OF INFECTION IN DEVELOPING COUNTRIES, 2024, 18 (08): : 1196 - 1203
  • [25] Development of RT-LAMP assay for detection of lead and cadmium toxicity using HepG2 cells
    Sharma, Sanjay
    Kapri, Ankita
    Joshi, Mansi
    Onteru, Suneel Kumar
    Singh, Dheer
    Environmental Science and Pollution Research, 2024, 31 (57) : 65328 - 65343
  • [26] Development of a reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay for the detection of Sugarcane mosaic virus and Sorghum mosaic virus in sugarcane
    Keizerweerd, Amber T.
    Chandra, Amaresh
    Grisham, Michael P.
    JOURNAL OF VIROLOGICAL METHODS, 2015, 212 : 23 - 29
  • [27] Development of fluorescent reverse transcription loop-mediated isothermal amplification (RT-LAMP) using quenching probes for the detection of the Middle East respiratory syndrome coronavirus
    Shirato, Kazuya
    Semba, Shohei
    El-Kafrawy, Sherif A.
    Hassan, Ahmed M.
    Tolah, Ahmed M.
    Takayama, Ikuyo
    Kageyama, Tsutomu
    Notomi, Tsugunori
    Kamitani, Wataru
    Matsuyama, Shutoku
    Azhar, Esam Ibraheem
    JOURNAL OF VIROLOGICAL METHODS, 2018, 258 : 41 - 48
  • [29] Multiplex detection of three banana viruses by reverse transcription loop-mediated isothermal amplification (RT-LAMP)
    Zhang, Jingxin
    Borth, Wayne
    Lin, Birun
    Melzer, Michael
    Shen, Huifang
    Pu, Xiaoming
    Sun, Dayuan
    Nelson, Scot
    Hu, John
    TROPICAL PLANT PATHOLOGY, 2018, 43 (06): : 543 - 551
  • [30] Development and evaluation of multiplex RT-LAMP assays for rapid and sensitive detection of foot-and-mouth disease virus
    Yamazaki, Wataru
    Mioulet, Valerie
    Murray, Lee
    Madi, Mikidache
    Haga, Takeshi
    Misawa, Naoaki
    Horii, Yoichiro
    King, Donald P.
    JOURNAL OF VIROLOGICAL METHODS, 2013, 192 (1-2) : 18 - 24