Development of an improved RT-LAMP assay for detection of currently circulating rubella viruses

被引:8
作者
Abo, H. [1 ]
Okamoto, K. [1 ]
Anraku, M. [1 ]
Otsuki, N. [1 ]
Sakata, M. [1 ]
Icenogle, J. [2 ]
Zheng, Q. [2 ]
Kurata, T. [3 ]
Kase, T. [3 ]
Komase, K. [1 ]
Takeda, M. [1 ]
Mori, Y. [1 ]
机构
[1] Natl Inst Infect Dis, Lab Rubella, Dept Virol 3, Murayama Branch, Tokyo 2080011, Japan
[2] Ctr Dis Control & Prevent, Measles Mumps Rubella & Herpes Virus Lab Branch, Div Viral Dis, Atlanta, GA 30333 USA
[3] Osaka Prefectural Inst Publ Hlth, Div Virol, Dept Infect Dis, Higashinari Ku, Osaka 5370025, Japan
关键词
Rubella; Diagnosis; RT-LAMP; MEDIATED ISOTHERMAL AMPLIFICATION; RAPID DETECTION; DIAGNOSIS; GENOME; RNA;
D O I
10.1016/j.jviromet.2014.06.013
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Rubella virus is the causative agent of rubella. The symptoms are usually mild, and characterized by a maculopapular rash and fever. However, rubella infection in pregnant women sometimes can result in the birth of infants with congenital rubella syndrome (CRS). Global efforts have been made to reduce and eliminate CRS. Although a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for detection of rubella virus has been reported, the primers contained several mismatched nucleotides with the genomes of currently circulating rubella virus strains. In the present study, a new RT-LAMP assay was established. The detection limit of this assay was 100-1000 PFU/reaction of viruses for all rubella genotypes, except for genotype 2C, which is not commonly found in the current era. Therefore, the new RI-LAMP assay can successfully detect all current rubella virus genotypes, and does not require sophisticated devices like TaqMan real-time PCR systems. This assay should be a useful assay for laboratory diagnosis of rubella and CRS. (C) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:73 / 77
页数:5
相关论文
共 23 条
[1]   Status of Global Virologic Surveillance for Rubella Viruses [J].
Abernathy, Emily S. ;
Huebschen, Judith M. ;
Muller, Claude P. ;
Jin, Li ;
Brown, David ;
Komase, Katsuhiro ;
Mori, Yoshio ;
Xu, Wenbo ;
Zhu, Zhen ;
Siqueira, Marilda M. ;
Shulga, Sergey ;
Tikhonova, Nina ;
Pattamadilok, Sirima ;
Incomserb, Patcha ;
Smit, Sheilagh B. ;
Akoua-Koffi, Chantal ;
Bwogi, Josephine ;
Lim, Wilina W. L. ;
Woo, Gibson K. S. ;
Triki, Hinda ;
Jee, Youngmee ;
Mulders, Mick N. ;
de Filippis, Ana Maria Bispo ;
Ahmed, Hinda ;
Ramamurty, Nalini ;
Featherstone, David ;
Icenogle, Joseph P. .
JOURNAL OF INFECTIOUS DISEASES, 2011, 204 :S524-S532
[2]  
[Anonymous], 2011, Wkly Epidemiol Rec, V86, P301
[3]  
[Anonymous], 2013, Wkly Epidemiol Rec, V88, P337
[4]  
Bellini B., 2011, MAN CLIN MICROBIOL, V2, P1378
[5]  
Centers for Disease Control and Prevention (CDC), 2008, MMWR Morb Mortal Wkly Rep, V57, P657
[6]   MOLECULAR-BIOLOGY OF RUBELLA-VIRUS [J].
FREY, TK .
ADVANCES IN VIRUS RESEARCH, VOL 44, 1994, 44 :69-160
[7]   Colorimetric detection of loop-mediated isothermal amplification reaction by using hydroxy naphthol blue [J].
Goto, Motoki ;
Honda, Eiichi ;
Ogura, Atsuo ;
Nomoto, Akio ;
Hanaki, Ken-Ichi .
BIOTECHNIQUES, 2009, 46 (03) :167-+
[8]   Rapid detection and typing of influenza A and B by loop-mediated isothermal amplification: Comparison with immunochromatography and virus isolation [J].
Ito, Masahiro ;
Watanabe, Masahiro ;
Nakagawa, Naoko ;
Ihara, Toshiaki ;
Okuno, Yoshinobu .
JOURNAL OF VIROLOGICAL METHODS, 2006, 135 (02) :272-275
[9]   Development and Evaluation of a Real-Time Reverse Transcription-Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Rift Valley Fever Virus in Clinical Specimens [J].
Le Roux, C. A. ;
Kubo, T. ;
Grobbelaar, A. A. ;
van Vuren, P. Jansen ;
Weyer, J. ;
Nel, L. H. ;
Swanepoel, R. ;
Morita, K. ;
Paweska, J. T. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2009, 47 (03) :645-651
[10]   Mutational analysis of the rubella virus nonstructural polyprotein and its cleavage products in virus replication and RNA synthesis [J].
Liang, YY ;
Gillam, S .
JOURNAL OF VIROLOGY, 2000, 74 (11) :5133-5141