A multiplex PCR kit for the detection of three major virulent genes in Enterococcus faecalis

被引:1
作者
Meena, Balakrishnan [1 ]
Anburajan, Lawrance [1 ]
Varma, Karthik Srinivasan [2 ]
Vinithkumar, Nambali Valsalan [1 ]
Kirubagaran, Ramalingam [3 ]
Dharani, Gopal [3 ]
机构
[1] Natl Inst Ocean Technol, Atal Ctr Ocean Sci & Technol Isl, Dollygunj PO, Port Blair 744103, Andaman & Nicob, India
[2] SAAI Electro Biogen India Pvt Ltd, Chennai 601204, Tamil Nadu, India
[3] Govt India, Marine Biotechnol Div, Ocean Sci & Technol Isl Grp, Minist Earth Sci,Natl Inst Ocean Technol, Chennai 600100, Tamil Nadu, India
关键词
Multiplex PCR; Enterococcus faecalis; Virulence genes; Enrichment medium; Sensitivity; INDICATOR BACTERIA; INFECTIONS; RESISTANCE; FOOD; CHICKENS;
D O I
10.1016/j.mimet.2020.106061
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
A multiplex PCR kit that detects three major virulence genes, gelE, hyl and asal, in Enterococcus faecalis was developed. Analyses of the available sequences of three major virulence genes and designed primers allowed us to develop the three-gene, multiplex PCR protocol that maintained the specificity of each primer pair. The resulting three amplicon bands for gelE, hyl and asal were even and distinct with product sizes of 213, 273 and 713 bp, respectively. The multiplex PCR procedure was validated with a total of 243 E. faecalis strains that included 02 ATCC strains, 109 isolates from marine samples (sediment, water and sea foods), 22 isolates from cattle fodder, 79 isolates fresh water samples and 31 isolates from nosocomial samples. Specificity of the kit was indicated by amplification of only three major virulent genes gelE, hyl and asal without any nonspecific bands. Tests for the limit of detection revealed that amplified genes from the sample with a minimum of 10(4) CFU/g or CFU/mL (10 cells/reaction) of E. faecalis and lower cell load samples, after a 3 h enrichment in NIOT-E. faecalis enrichment medium at 37 degrees C, a sensitivity level of 10 CFU/g or CFU/mL was achieved.
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页数:11
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共 34 条
  • [1] Aerestrup F.M., 2002, ENTEROCOCCI PATHOGEN, P79
  • [2] American Society for Microbiology, 2003, MANUAL CLIN MICROBIO, p415 422
  • [3] Ausubel F. M., 1994, CURRENT PROTOCOLS MO
  • [4] Speciation and antimicrobial resistance of Enterococci isolated from recreational beaches in Malaysia
    Dada, Ayokunle Christopher
    Ahmad, Asmat
    Usup, Gires
    Heng, Lee Yook
    [J]. ENVIRONMENTAL MONITORING AND ASSESSMENT, 2013, 185 (02) : 1583 - 1599
  • [5] Dogru AK, 2010, KAFKAS UNIV VET FAK, V16, pS129
  • [6] Molecular screening of Enterococcus virulence determinants and potential for genetic exchange between food and medical isolates
    Eaton, TJ
    Gasson, MJ
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (04) : 1628 - 1635
  • [7] Alkaline stress response in Enterococcus faecalis: Adaptation, cross-protection, and changes in protein synthesis
    Flahaut, S
    Hartke, A
    Giard, JC
    Auffray, Y
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (02) : 812 - 814
  • [8] Associations between the presence and magnitude of Escherichia coli O157 in feces at harvest and contamination of preintervention beef carcasses
    Fox, J. T.
    Renter, D. G.
    Sanderson, M. W.
    Nutsch, A. L.
    Shi, X.
    Nagaraja, T. G.
    [J]. JOURNAL OF FOOD PROTECTION, 2008, 71 (09) : 1761 - 1767
  • [9] Enterococci at the crossroads of food safety?
    Franz, CMAP
    Holzapfel, WH
    Stiles, ME
    [J]. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 1999, 47 (1-2) : 1 - 24
  • [10] Genetic Variability of Vancomycin-Resistant Enterococcus faecium and Enterococcus faecalis Isolates from Humans, Chickens, and Pigs in Malaysia
    Getachew, Yitbarek
    Hassan, Latiffah
    Zakaria, Zunita
    Aziz, Saleha Abdul
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2013, 79 (15) : 4528 - 4533