Sushi.R: flexible, quantitative and integrative genomic visualizations for publication-quality multi-panel figures

被引：131

作者：

Phanstiel, Douglas H. ^{[1
]}

Boyle, Alan P. ^{[1
]}

Araya, Carlos L. ^{[1
]}

Snyder, Michael P. ^{[1
]}

机构：

[1] Stanford Univ, Sch Med, Dept Genet, Stanford, CA 94305 USA

来源：

BIOINFORMATICS | 2014年 / 30卷 / 19期

关键词：

D O I：

10.1093/bioinformatics/btu379

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Motivation: Interpretation and communication of genomic data require flexible and quantitative tools to analyze and visualize diverse data types, and yet, a comprehensive tool to display all common genomic data types in publication quality figures does not exist to date. To address this shortcoming, we present Sushi. R, an R/Bioconductor package that allows flexible integration of genomic visualizations into highly customizable, publication-ready, multi-panel figures from common genomic data formats including Browser Extensible Data (BED), bedGraph and Browser Extensible Data Paired-End (BEDPE).

引用

页码：2808 / 2810

页数：3

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