Identification of a Mitochondria-Related Gene Signature to Predict the Prognosis in AML

被引:12
作者
Jiang, Nan [1 ,2 ,3 ]
Zhang, Xinzhuo [2 ]
Chen, Qi [4 ]
Kantawong, Fahsai [3 ]
Wan, Shengli [1 ,3 ,4 ]
Liu, Jian [1 ]
Li, Hua [1 ]
Zhou, Jie [1 ]
Lu, Bin [5 ]
Wu, Jianming [1 ]
机构
[1] Southwest Med Univ, Sch Pharm, Luzhou, Peoples R China
[2] Southwest Med Univ, Foreign Language Sch, Luzhou, Peoples R China
[3] Chiang Mai Univ, Fac Associated Med Sci, Chiang Mai, Thailand
[4] Southwest Med Univ, Affiliated Hosp, Luzhou, Peoples R China
[5] Univ South China, Affiliated Hosp 2, Hengyang Med Sch, Hengyang, Peoples R China
来源
FRONTIERS IN ONCOLOGY | 2022年 / 12卷
基金
中国国家自然科学基金;
关键词
acute myeloid leukemia; prognostic signature; mitochondria-related genes; The Cancer Genome Atlas; Therapeutically Applicable Research to Generate Effective Treatments; LASSOR; EPIGENOMIC LANDSCAPES; THERAPEUTIC TARGET; CANCER; EXPRESSION; CELLS; PATHWAY; INNATE; DNA;
D O I
10.3389/fonc.2022.823831
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Mitochondria-related metabolic reprogramming plays a major role in the occurrence, development, drug resistance, and recurrence of acute myeloid leukemia (AML). However, the roles of mitochondria-related genes (MRGs) in the prognosis and immune microenvironment for AML patients remain largely unknown. In this study, by least absolute shrinkage and selection operator (LASSO) Cox regression analysis, 4 MRGs' (HPDL, CPT1A, IDH3A, and ETFB) signature was established that demonstrated good robustness in TARGET AML datasets. The univariate and multivariate Cox regression analyses both demonstrated that the MRG signature was a robust independent prognostic factor in overall survival prediction with high accuracy for AML patients. Based on the risk score calculated by the signature, samples were divided into high- and low-risk groups. Gene set enrichment analysis (GSEA) suggested that the MRG signature is involved in the immune-related pathways. Via immune infiltration analysis and immunosuppressive genes analysis, we found that MRG risk of AML patients was strikingly positively correlated with an immune cell infiltration and expression of critical immune checkpoints, indicating that the poor prognosis might be caused by immunosuppressive tumor microenvironment (TME). In summary, the signature based on MRGs could act as an independent risk factor for predicting the clinical prognosis of AML and could also reflect an association with the immunosuppressive microenvironment, providing a novel method for AML metabolic and immune therapy based on the regulation of mitochondrial function.
引用
收藏
页数:15
相关论文
共 50 条
  • [41] A Mitophagy-Related Gene Signature for Subtype Identification and Prognosis Prediction of Hepatocellular Carcinoma
    Liu, Chang
    Wu, Zhen
    Wang, Liping
    Yang, Qian
    Huang, Ji
    Huang, Jichang
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (20)
  • [42] Identification of DNA methylation signature to predict prognosis in gastric adenocarcinoma
    Hu, Sifeng
    Yin, Xiankun
    Zhang, Guangyong
    Meng, Fanmei
    JOURNAL OF CELLULAR BIOCHEMISTRY, 2019, 120 (07) : 11708 - 11715
  • [43] Identification and validation of the necroptosis-related gene signature related to prognosis and tumor immune in hepatocellular carcinoma
    Xiang, Zhiping
    Mranda, Geofrey Mahiki
    Zhou, Xingguo
    Xue, Ying
    Wang, Yu
    Wei, Tian
    Liu, Junjian
    Ding, Yinlu
    MEDICINE, 2022, 101 (36) : E30219
  • [44] Identification of SSBP1 as a ferroptosis-related biomarker of glioblastoma based on a novel mitochondria-related gene risk model and in vitro experiments
    Su, Jun
    Li, Yue
    Liu, Qing
    Peng, Gang
    Qin, Chaoying
    Li, Yang
    JOURNAL OF TRANSLATIONAL MEDICINE, 2022, 20 (01)
  • [45] Identification of a metabolic gene panel to predict the prognosis of myelodysplastic syndrome
    Hu Fang
    Chen Si-liang
    Dai Yu-jun
    Wang Yun
    Qin Zhe-yuan
    Li Huan
    Shu Ling-ling
    Li Jin-yuan
    Huang Han-ying
    Liang Yang
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2020, 24 (11) : 6373 - 6384
  • [46] Identification and Validation of a Cancer-Testis Antigen-Related Signature to Predict the Prognosis in Stomach Adenocarcinoma
    Bian, Geng
    Cao, Jie
    Li, Weiyu
    Huang, Dabing
    Ding, Xiping
    Zang, Xiaodong
    Ye, Yingquan
    Li, Ping
    JOURNAL OF CANCER, 2024, 15 (11): : 3596 - 3611
  • [47] Identification of a ferroptosis-related gene signature for the prognosis of pediatric neuroblastoma
    Lin, Xijin
    Shao, Kongfeng
    Lin, Zhuangbin
    Liang, Qiandong
    Li, Xiaoyan
    Chen, Haiyan
    Wu, Junxin
    TRANSLATIONAL CANCER RESEARCH, 2024, 13 (07) : 3678 - 3694
  • [48] A novel natural killer-related signature to effectively predict prognosis in hepatocellular carcinoma
    Xi, Deyang
    Wang, Jialu
    Yang, Yinshuang
    Ji, Fang
    Li, Chunyang
    Yan, Xuebing
    BMC MEDICAL GENOMICS, 2023, 16 (01)
  • [49] Drug metabolism-related eight-gene signature can predict the prognosis of gastric adenocarcinoma
    Yin, Hong-Mei
    He, Qiong
    Chen, Jia
    Li, Zhen
    Yang, Wanli
    Hu, Xiaobo
    JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2021, 35 (12)
  • [50] The role of mitochondria-related lncRNAs in characterizing the immune landscape and supervising the prognosis of osteosarcoma
    Zhang, Yiming
    Ru, Nan
    Xue, Zhaowen
    Gan, Wenyi
    Pan, Ruilin
    Wu, Zelin
    Chen, Zihang
    Wang, Huajun
    Zheng, Xiaofei
    JOURNAL OF BONE ONCOLOGY, 2023, 43