Isolation and characterization of a novel Escherichia coli phage Kayfunavirus ZH4

被引:11
作者
Li, Lei [1 ]
Wu, Yuxing [1 ]
Ma, Dongxin [1 ]
Zhou, Yuqing [1 ]
Wang, Leping [1 ]
Han, Kaiou [1 ]
Cao, Yajie [1 ]
Wang, Xiaoye [1 ]
机构
[1] Guangxi Univ, Coll Anim Sci & Technol, Nanning 530004, Guangxi, Peoples R China
基金
中国国家自然科学基金;
关键词
Escherichia coli phage; Whole-genomic analysis; Phage characterization; MYOVIRIDAE BACTERIOPHAGE; GENOMIC ANALYSIS; DAIRY-COWS; ENDOLYSINS; MASTITIS; SAMPLES; LYSIS;
D O I
10.1007/s11262-022-01916-6
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Escherichia coli, a gram-negative bacterium, was generally considered conditional pathogenic bacteria and the proportion of bacteria resistant to commonly used specified antibacterial drugs exceeded 50%. Phage therapeutic application has been revitalized since antibiotic resistance in bacteria was increasing. Compared with antibiotics, phage is the virus specific to bacterial hosts. However, further understanding of phage-host interactions is required. In this study, a novel phage specific to a E. coli strain, named as phage Kayfunavirus ZH4, was isolated and characterized. Transmission electron microscopy showed that phage ZH4 belongs to the family Autographiviridae. The whole-genome analysis showed that the length of phage ZH4 genome was 39,496 bp with 49 coding domain sequence (CDS) and no tRNA was detected. Comparative genome and phylogenetic analysis demonstrated that phage ZH4 was highly similar to phages belonging to the genus Kayfunavirus. Moreover, the highest average nucleotide identity (ANI) values of phage ZH4 with all the known phages was 0.86, suggesting that ZH4 was a relatively novel phage. Temperature and pH stability tests showed that phage ZH4 was stable from 4 degrees to 50 degrees C and pH range from 3 to 11. Host range of phage ZH4 showed that there were only 2 out of 17 strains lysed by phage ZH4. Taken together, phage ZH4 was considered as a novel phage with the potential for applications in the food and pharmaceutical industries.
引用
收藏
页码:448 / 457
页数:10
相关论文
共 37 条
[1]   Global distribution of nearly identical phage-encoded DNA sequences [J].
Breitbart, M ;
Miyake, JH ;
Rohwer, F .
FEMS MICROBIOLOGY LETTERS, 2004, 236 (02) :249-256
[2]  
Briers Y, 2015, FUTURE MICROBIOL, V10, P377, DOI [10.2217/FMB.15.8, 10.2217/fmb.15.8]
[3]   Selection of an Escherichia coli O157:H7 bacteriophage for persistence in the circulatory system of mice infected experimentally [J].
Capparelli, R ;
Ventimiglia, I ;
Roperto, S ;
Fenizia, D ;
Iannelli, D .
CLINICAL MICROBIOLOGY AND INFECTION, 2006, 12 (03) :248-253
[4]   Evolution of mosaically related tailed bacteriophage genomes seen through the lens of phage P22 virion assembly [J].
Casjens, Sherwood R. ;
Thuman-Commike, Pamela A. .
VIROLOGY, 2011, 411 (02) :393-415
[5]   Isolation and characterization of novel giant Stenotrophomonas maltophilia phage φSMA5 [J].
Chang, HC ;
Chen, CR ;
Lin, JW ;
Shen, GH ;
Chang, KM ;
Tseng, YH ;
Weng, SF .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (03) :1387-1393
[6]  
Delesalle VA., 2016, Bacteriophage, V6, pe1219441, DOI [DOI 10.1080/21597081.2016.1219441, 10.1080/21597081.2016.1219441]
[7]   Micron-scale holes terminate the phage infection cycle [J].
Dewey, Jill S. ;
Savva, Christos G. ;
White, Rebecca L. ;
Vitha, Stanislav ;
Holzenburg, Andreas ;
Young, Ry .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (05) :2219-2223
[8]   Application of phage therapy: Synergistic effect of phage EcSw (ΦEcSw) and antibiotic combination towards antibiotic-resistant Escherichia coli [J].
Easwaran, Maheswaran ;
De Zoysa, Mahanama ;
Shin, Hyun-Jin .
TRANSBOUNDARY AND EMERGING DISEASES, 2020, 67 (06) :2809-2817
[9]   Molecular Mechanisms That Mediate Colonization of Shiga Toxin-Producing Escherichia coli Strains [J].
Farfan, Mauricio J. ;
Torres, Alfredo G. .
INFECTION AND IMMUNITY, 2012, 80 (03) :903-913
[10]  
GARNAUT R, 1992, ECONOMIC REFORM AND INTERNATIONALISATION: CHINA AND THE PACIFIC REGION, P1