Detection of Pectinatus spp. by PCR using 16S-23S rDNA spacer regions

被引:0
作者
Motoyama, Y [1 ]
Ogata, T [1 ]
机构
[1] Asahi Breweries Ltd, Brewing Res & Dev Lab, Moriya, Ibaraki 3020106, Japan
关键词
D O I
暂无
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A polymerase chain reaction (PCR) method for the detection of Pectinatus cerevisiiphilus and P. frisingensis was developed. The 16S rRNA gene (rDNA) and the spacer regions between the 16S rDNA and the 23S rDNA genes were used for the PCR reaction. The species-specific sequences in the spacer region between the 16S rDNA and the 23S rDNA genes were selected for use as PCR primers. The method developed in this study was rapid and sensitive. Furthermore, this method allowed identification at the species level, even between very closely related species, such as P. cerevisiiphilus and P. frisingensis.
引用
收藏
页码:4 / 7
页数:4
相关论文
共 50 条
  • [41] Comparison of sequence analysis of 16S-23S rDNA spacer regions, AFLP analysis and DNA-DNA hybridizations in Bradyrhizobium
    Willems, A
    Coopman, R
    Gillis, M
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 : 623 - 632
  • [42] Detection of Pseudomonas syringae pv. actinidiae using polymerase chain reaction (PCR) primers based on the 16S-23S rDNA intertranscribed spacer region and comparison with PCR primers based on other gene regions
    Rees-George, J.
    Vanneste, J. L.
    Cornish, D. A.
    Pushparajah, I. P. S.
    Yu, J.
    Templeton, M. D.
    Everett, K. R.
    PLANT PATHOLOGY, 2010, 59 (03) : 453 - 464
  • [43] Restriction of 16S-23S intergenic rDNA for diversity evaluation of Azospirillum amazonense isolated from different Brachiaria spp.
    dos Reis Junior, Fabio Bueno
    Reis, Veronica Massena
    Teixeira, Katia Regina dos Santos
    PESQUISA AGROPECUARIA BRASILEIRA, 2006, 41 (03) : 431 - 438
  • [44] Identification of staphylococcal and streptococcal causes of bovine mastitis using 16S-23S rRNA spacer regions
    Forsman, P
    TilsalaTimisjarvi, A
    Alatossava, T
    MICROBIOLOGY-UK, 1997, 143 : 3491 - 3500
  • [45] Grouping of Bradyrhizobium USDA strains by sequence analysis of 16S rDNA and 16S-23S rDNA internal transcribed spacer region
    Saeki, Y
    Aimi, N
    Hashimoto, M
    Tsukamoto, S
    Kaneko, A
    Yoshida, N
    Nagatomo, Y
    Akao, S
    SOIL SCIENCE AND PLANT NUTRITION, 2004, 50 (04) : 517 - 525
  • [46] Applicability of the 16S-23S rDNA internal spacer for PCR detection of the phytostimulatory PGPR inoculant Azospirillum lipoferum CRT1 in field soil
    Baudoin, E.
    Couillerot, O.
    Spaepen, S.
    Moenne-Loccoz, Y.
    Nazaret, S.
    JOURNAL OF APPLIED MICROBIOLOGY, 2010, 108 (01) : 25 - 38
  • [47] Phylogenetic analysis of Streptomyces spp. isolated from potato scab lesions in Korea on the basis of 16S rRNA gene and 16S-23S rDNA internally transcribed spacer sequences
    Song, J
    Lee, SC
    Kang, JW
    Baek, HJ
    Suh, JW
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 : 203 - 209
  • [48] PCR-based method for targeting 16S-23S rRNA intergenic spacer regions among Vibrio species
    Hoffmann, Maria
    Brown, Eric W.
    Feng, Peter C. H.
    Keys, Christine E.
    Fischer, Markus
    Monday, Steven R.
    BMC MICROBIOLOGY, 2010, 10
  • [49] Simultaneous detection of Listeria spp and Listeria monocytogenes by reverse hybridization with 16S-23S rRNA spacer probes
    Rijpens, NP
    Jannes, G
    VanAsbroeck, M
    Herman, LMF
    Rossau, R
    MOLECULAR AND CELLULAR PROBES, 1995, 9 (06) : 423 - 432
  • [50] RISSC:: a novel database for ribosomal 16S-23S RNA genes spacer regions
    García-Martínez, J
    Bescós, I
    Rodríguez-Sala, JJ
    Rodríguez-Valera, F
    NUCLEIC ACIDS RESEARCH, 2001, 29 (01) : 178 - 180