Modeling the repair of DNA strand breaks caused by γ-radiation in a minichromosome

被引:7
作者
Lakomiec, K. [1 ]
Kumala, S. [2 ]
Hancock, R. [2 ]
Rzeszowska-Wolny, J. [1 ]
Fujarewicz, K. [1 ]
机构
[1] Silesian Tech Univ, Inst Automat Control, Gliwice, Poland
[2] Univ Laval, Canc Res Ctr, CRCHUQ, Quebec City, PQ, Canada
关键词
DNA repair; radiation; models; ordinary differential equations; minichromosome; CELL SIGNALING PATHWAYS; ADJOINT SYSTEMS; DAMAGE;
D O I
10.1088/1478-3975/11/4/045003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The objective of the studies described here was the development of a mathematical model which would fit experimental data for the repair of single and double strand breaks induced in DNA in living cells by exposure to ionizing radiation, and which would allow to better understand the processes of DNA repair. DNA breaks are believed to play the major role in radiation-induced lethality and formation of chromosome deletions, and are therefore crucial to the response of cells to radiotherapy. In an initial model which we reported on the basis of data for the repair of Epstein-Barr minichromosomes in irradiated Raji cells, we assumed that DNA breaks are induced only at the moment of irradiation and are later removed by repair systems. This work gives a development of that mathematical model which fits the experimental results more precisely and suggests strongly that DNA breaks are generated not only by direct irradiation but also later, probably by systems engaged in repair of oxidative damage.
引用
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页数:8
相关论文
共 19 条
[1]   DNA damage and repair: From molecular mechanisms to health implications [J].
Altieri, Fabio ;
Grillo, Caterina ;
Maceroni, Manola ;
Chichiarelli, Silvia .
ANTIOXIDANTS & REDOX SIGNALING, 2008, 10 (05) :891-937
[2]   Regulation of DNA repair throughout the cell cycle [J].
Branzei, Dana ;
Foiani, Marco .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2008, 9 (04) :297-308
[3]   Co-ordination of DNA single strand break repair [J].
Dianou, Grigory L. ;
Parsons, Jason L. .
DNA REPAIR, 2007, 6 (04) :454-460
[4]  
Dianov GL, 2001, PROG NUCLEIC ACID RE, V68, P285
[5]  
Dogliotti E, 2001, PROG NUCLEIC ACID RE, V68, P3
[6]   On fitting of mathematical models of cell signaling pathways using adjoint systems [J].
Fujarewicz, K ;
Kimmel, M ;
Swierniak, A .
MATHEMATICAL BIOSCIENCES AND ENGINEERING, 2005, 2 (03) :527-534
[7]  
Fujarewicz K, 2004, LECT NOTES ARTIF INT, V3070, P190
[8]   Adjoint systems for models of cell signaling pathways and their application to parameter fitting [J].
Fujarewicz, Krzysztof ;
Kimmel, Marek ;
Lipniacki, Tomasz ;
Swierniak, Andrzej .
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2007, 4 (03) :322-335
[9]   INITIAL EVENTS IN THE CELLULAR EFFECTS OF IONIZING-RADIATIONS - CLUSTERED DAMAGE IN DNA [J].
GOODHEAD, DT .
INTERNATIONAL JOURNAL OF RADIATION BIOLOGY, 1994, 65 (01) :7-17
[10]  
Karschau J, 2011, MATTER LIFE DEATH MO