KSSOLV-A MATLAB Toolbox for Solving the Kohn-Sham Equations

被引:97
作者
Yang, Chao [1 ]
Meza, Juan C. [1 ]
Lee, Byounghak [1 ]
Wang, Lin-Wang [1 ]
机构
[1] Univ Calif Berkeley, Lawrence Berkeley Lab, Computat Res Div, Berkeley, CA 94720 USA
来源
ACM TRANSACTIONS ON MATHEMATICAL SOFTWARE | 2009年 / 36卷 / 02期
关键词
Algorithms; Design; Planewave discretization; pseudopotential; nonlinear eigenvalue problem; density functional theory (DFT); Kohn-Sham equations; self-consistent field iteration (SCF); direct constrained minimization (DCM); electronic structure calculation; TOTAL-ENERGY CALCULATIONS; ALGORITHMS; CHEMISTRY; SCHEME;
D O I
10.1145/1499096.1499099
中图分类号
TP31 [计算机软件];
学科分类号
081202 ; 0835 ;
摘要
We describe the design and implementation of KSSOLV, a MATLAB toolbox for solving a class of nonlinear eigenvalue problems known as the Kohn-Sham equations. These types of problems arise in electronic structure calculations, which are nowadays essential for studying the microscopic quantum mechanical properties of molecules, solids, and other nanoscale materials. KSSOLV is well suited for developing new algorithms for solving the Kohn-Sham equations and is designed to enable researchers in computational and applied mathematics to investigate the convergence properties of the existing algorithms. The toolbox makes use of the object-oriented programming features available in MATLAB so that the process of setting up a physical system is straightforward and the amount of coding effort required to prototype, test, and compare new algorithms is significantly reduced. All of these features should also make this package attractive to other computational scientists and students who wish to study small-to medium-size systems.
引用
收藏
页数:35
相关论文
共 54 条
[1]   New advances in chemistry and materials science with CPMD and parallel computing [J].
Andreoni, W ;
Curioni, A .
PARALLEL COMPUTING, 2000, 26 (7-8) :819-842
[2]  
[Anonymous], 1997, Applied Numerical Linear Algebra
[3]   ABINITIO MOLECULAR-DYNAMICS - ANALYTICALLY CONTINUED ENERGY FUNCTIONALS AND INSIGHTS INTO ITERATIVE SOLUTIONS [J].
ARIAS, TA ;
PAYNE, MC ;
JOANNOPOULOS, JD .
PHYSICAL REVIEW LETTERS, 1992, 69 (07) :1077-1080
[4]  
Ashcroft N., 1976, Solid State Physics
[5]   Computation of large invariant subspaces using polynomial filtered Lanczos iterations with applications in density functional theory [J].
Bekas, C. ;
Kokiopoulou, E. ;
Saad, Yousef .
SIAM JOURNAL ON MATRIX ANALYSIS AND APPLICATIONS, 2008, 30 (01) :397-418
[6]  
Bloch F., 1928, Z PHYS, V52, P555, DOI DOI 10.1007/BF01339455
[7]   On the convergence of SCF algorithms for the Hartree-Fock equations [J].
Cancès, E ;
Le Bris, C .
ESAIM-MATHEMATICAL MODELLING AND NUMERICAL ANALYSIS-MODELISATION MATHEMATIQUE ET ANALYSE NUMERIQUE, 2000, 34 (04) :749-774
[8]   Self-consistent field algorithms for Kohn-Sham models with fractional occupation numbers [J].
Cancès, E .
JOURNAL OF CHEMICAL PHYSICS, 2001, 114 (24) :10616-10622
[9]  
Cancès E, 2000, INT J QUANTUM CHEM, V79, P82, DOI 10.1002/1097-461X(2000)79:2<82::AID-QUA3>3.0.CO
[10]  
2-I