High quality draft genome sequence of Streptomyces sp. strain AW19M42 isolated from a sea squirt in Northern Norway

被引：0

作者：

Bjerga, Gro Elin Kjaereng ^{[1
]}

Hjerde, Erik ^{[1
]}

De Santi, Concetta ^{[1
,2
]}

Williamson, Adele Kim ^{[1
]}

Smalas, Arne Oskar ^{[1
]}

Willassen, Nils Peder ^{[1
]}

Altermark, Bjorn ^{[1
]}

机构：

[1] Univ Tromso, Dept Chem, Fac Sci & Technol, Norstruct, N-9001 Tromso, Norway

[2] CNR, Inst Prot Biochem, Naples, Italy

来源：

STANDARDS IN GENOMIC SCIENCES | 2014年 / 9卷 / 03期

关键词：

Bioprospecting; enzymes; metabolites; Streptomyces; Actinobacteria; CLASSIFICATION; ANTIBIOTICS; UNIFICATION; BACTERIA; PROPOSAL; WAKSMAN; GENE; ACTINOBACTERIA; NOMENCLATURE; EMENDATION;

D O I：

10.4056/sigs.5039801

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Here we report the 8 Mb high quality draft genome of Streptomyces sp. strain AW19M42, together with specific properties of the organism and the generation, annotation and analysis of its genome sequence. The genome encodes 7,727 putative open reading frames, of which 6,400 could be assigned with COG categories. Also, 62 tRNA genes and 8 rRNA operons were identified. The genome harbors several gene clusters involved in the production of secondary metabolites. Functional screening of the isolate was positive for several enzymatic activities, and some candidate genes coding for those activities are listed in this report. We find that this isolate shows biotechnological potential and is an interesting target for bioprospecting.

引用

页数：11

共 45 条

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