Metabolomics biomarkers for tuberculosis diagnostics: current status and future objectives

被引:38
作者
du Preez, Ilse [1 ]
Luies, Laneke [1 ]
Loots, Du Toit [1 ]
机构
[1] North West Univ, Human Metabol, Sch Phys & Chem Sci, Potchefstroom Campus,Private Bag x6001,Box 269, ZA-2531 Potchefstroom, South Africa
基金
新加坡国家研究基金会;
关键词
biomarkers; blood and tissue; breath; culture; diagnostics; metabolites; metabolomics; sputum; tuberculosis; urine; PERFORMANCE LIQUID-CHROMATOGRAPHY; ELECTRONIC-NOSE TECHNOLOGY; MYCOBACTERIUM-TUBERCULOSIS; PULMONARY TUBERCULOSIS; RAPID IDENTIFICATION; SPUTUM; DISCOVERY; METABOLISM; RESISTANCE; MUTATIONS;
D O I
10.2217/bmm-2016-0287
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Numerous studies have contributed to our current understanding of the complex biology of pulmonary tuberculosis and subsequently provided solutions to its control or eradication. Metabolomics, a newcomer to the Omics research domain, has significantly contributed to this understanding by identifying biomarkers originating from the disease- associated metabolome adaptations of both the microbe and host. These biomarkers have shed light on previously unknown disease mechanisms, many of which have been implemented toward the development of improved diagnostic strategies. In this review, we will discuss the role that metabolomics has played in tuberculosis research to date, with a specific focus on new biomarker identification, and how these have contributed to improved disease characterization and diagnostics, and their potential clinical applications.
引用
收藏
页码:179 / 194
页数:16
相关论文
共 50 条
[1]  
Albert H, 2002, INT J TUBERC LUNG D, V6, P529
[2]   Use of Urine Volatile Organic Compounds To Discriminate Tuberculosis Patients from Healthy Subjects [J].
Banday, Khalid Muzaffar ;
Pasikanti, Kishore Kumar ;
Chan, Eric Chun Yong ;
Singla, Rupak ;
Rao, Kanury Venkata Subba ;
Chauhan, Virander Singh ;
Nanda, Ranjan Kumar .
ANALYTICAL CHEMISTRY, 2011, 83 (14) :5526-5534
[3]   Towards complete and accurate reporting of studies of diagnostic accuracy: The STARD initiative [J].
Bossuyt, PM ;
Reitsma, JB ;
Bruns, DE ;
Gatsonis, CA ;
Glasziou, PP ;
Irwig, LM ;
Lijmer, JG ;
Moher, D ;
Rennie, D ;
de Vet, HCW .
ANNALS OF INTERNAL MEDICINE, 2003, 138 (01) :40-44
[4]   Statistical strategies for avoiding false discoveries in metabolomics and related experiments [J].
Broadhurst, David I. ;
Kell, Douglas B. .
METABOLOMICS, 2006, 2 (04) :171-196
[5]   IDENTIFICATION OF MYCOBACTERIA BY HIGH-PERFORMANCE LIQUID-CHROMATOGRAPHY [J].
BUTLER, WR ;
JOST, KC ;
KILBURN, JO .
JOURNAL OF CLINICAL MICROBIOLOGY, 1991, 29 (11) :2468-2472
[6]   Analysis of fatty acids in sputum from patients with pulmonary tuberculosis using gas chromatography-mass spectrometry preceded by solid-phase microextraction and post-derivatization on the fiber [J].
Cha, Dongmei ;
Cheng, Dong'e ;
Liu, Mingming ;
Zeng, Zhaorui ;
Hu, Xiaowei ;
Guan, Wenwu .
JOURNAL OF CHROMATOGRAPHY A, 2009, 1216 (09) :1450-1457
[7]   Decreased serum 5-oxoproline in TB patients is associated with pathological damage of the lung [J].
Che, Nanying ;
Cheng, Jianhua ;
Li, Haijing ;
Zhang, Zhiguo ;
Zhang, Xuxia ;
Ding, Zhixin ;
Dong, Fangting ;
Li, Chuanyou .
CLINICA CHIMICA ACTA, 2013, 423 :5-9
[8]   Deregulated Tyrosine-Phenylalanine Metabolism in Pulmonary Tuberculosis Patients [J].
Das, Mrinal Kumar ;
Bishwal, Subasa Chandra ;
Das, Aleena ;
Dabral, Deepti ;
Badireddy, Vinod Kumar ;
Pandit, Bhaswati ;
Varghese, George M. ;
Nanda, Ranjan Kumar .
JOURNAL OF PROTEOME RESEARCH, 2015, 14 (04) :1947-1956
[9]  
Dhingra VK., 2003, Immunol, V17, P67
[10]   New sputum metabolite markers implicating adaptations of the host to Mycobacterium tuberculosis, and vice versa [J].
du Preez, I. ;
Loots, D. T. .
TUBERCULOSIS, 2013, 93 (03) :330-337