Optical Screening of Female Breast Cancer from Whole Blood Using Raman Spectroscopy

被引:22
作者
Bilal, Maria [1 ,2 ]
Bilal, Muhammad [1 ]
Tabassum, Sobia [3 ]
Saleem, Muhammad [1 ]
Mahmood, Humera [4 ]
Sarwar, Usama [3 ]
Bangush, Hina [3 ]
Munir, Faiza [3 ]
Zia, Muhammad Aslam [1 ]
Ahmed, Mushtaq [1 ]
Shahzada, Shaista
Khan, Ehsan Ullah [2 ,5 ]
机构
[1] Natl Inst Lasers & Optron, Lehtrar Rd, Islamabad, Pakistan
[2] Int Islamic Univ, Dept Phys, Islamabad, Pakistan
[3] Int Islamic Univ, Dept Bioinformat, Islamabad, Pakistan
[4] NORI Hosp Islamabad, Dept Oncol, Islamabad, Pakistan
[5] Muslim Youth Univ, Dept Phys, Islamabad, Pakistan
关键词
Breast cancer screening; multivariate analysis; Raman spectroscopy; partial least squares regression; PLS; TISSUE; MICROCALCIFICATIONS; PROGRESSION; PATHWAYS; SERUM;
D O I
10.1177/0003702816667516
中图分类号
TH7 [仪器、仪表];
学科分类号
0804 ; 080401 ; 081102 ;
摘要
This study is intended to develop a screening method for female breast cancer (BRC) from whole blood using Raman spectroscopy. A multivariate partial least squares (PLS) regression model is developed which is based upon Raman spectra of BRC-positive and healthy participants. It yields coefficients of regression at the corresponding Raman shifts. These coefficients represent the changes in molecular structures which are associated with the progress of disease. The present study pointed out some specific molecules which differentiated BRC-positive and healthy groups. In the BRC-positive group, a rising trend of calcium oxalate, calcium hydroxyapatite, phosphatidylserine and qunoid ring, and a lowering trend of tryptophan, tyrosine, and proline were observed in PLS-based coefficients of regression. The R-square value of the model was found to be 0.987, which is accepted clinically. The model was tested for the prediction of 50 randomly collected samples at a cutoff value of 0.5 with the gray region defined in the range of 0.4-0.6. Goodness of fit was estimated using accuracy, sensitivity, specificity, receiver operating characteristic (ROC) curve, and area under ROC curve. All of these parameters were found to be very promising.
引用
收藏
页码:1004 / 1013
页数:10
相关论文
共 44 条
[1]   Spectrum of breast cancer in Asian women [J].
Agarwal, Gaurav ;
Pradeep, P. V. ;
Aggarwal, Vivek ;
Yip, Cheng-Har ;
Cheung, Polly S. Y. .
WORLD JOURNAL OF SURGERY, 2007, 31 (05) :1031-1040
[2]   Optical diagnosis of malaria infection in human plasma using Raman spectroscopy [J].
Bilal, Muhammad ;
Saleem, Muhammad ;
Amanat, Samina Tufail ;
Shakoor, Huma Abdul ;
Rashid, Rashad ;
Mahmood, Arshad ;
Ahmed, Mushtaq .
JOURNAL OF BIOMEDICAL OPTICS, 2015, 20 (01)
[3]   Quinoids, quinoid radicals, and phenoxyl radicals formed from estrogens and antiestrogens [J].
Bolton, JL .
TOXICOLOGY, 2002, 177 (01) :55-65
[4]  
Burnett LC, 2009, CURRENT PROTOCOLS MI, V13, p1A
[5]   APOBEC3B is an enzymatic source of mutation in breast cancer [J].
Burns, Michael B. ;
Lackey, Lela ;
Carpenter, Michael A. ;
Rathore, Anurag ;
Land, Allison M. ;
Leonard, Brandon ;
Refsland, Eric W. ;
Kotandeniya, Delshanee ;
Tretyakova, Natalia ;
Nikas, Jason B. ;
Yee, Douglas ;
Temiz, Nuri I. A. ;
Donohue, Duncan E. ;
McDougle, Rebecca M. ;
Brown, William L. ;
Law, Emily K. ;
Harris, Reuben S. .
NATURE, 2013, 494 (7437) :366-370
[6]   CDHI promoter hypermethylation and E-cadherin protein expression in infiltrating breast cancer [J].
Caldeira, Jose Roberto F. ;
Prando, Erika C. ;
Quevedo, Francisco C. ;
Moraes Neto, Francisco A. ;
Rainho, Claudia A. ;
Rogatto, Silvia R. .
BMC CANCER, 2006, 6 (1)
[7]   A Watershed Approach to Improve Water Quality: Case Study of Clean Water Services' Tualatin River Program [J].
Cochran, Bobby ;
Logue, Charles .
JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION, 2011, 47 (01) :29-38
[8]   Microcalcifications in breast cancer: Lessons from physiological mineralization [J].
Cox, Rachel F. ;
Morgan, Maria P. .
BONE, 2013, 53 (02) :437-450
[9]   Raman spectroscopy of parathyroid tissue pathology [J].
Das, Kaustuv ;
Stone, Nicholas ;
Kendall, Catherine ;
Fowler, Clare ;
Christie-Brown, J. .
LASERS IN MEDICAL SCIENCE, 2006, 21 (04) :192-197
[10]   Glutamic acid as anticancer agent: An overview [J].
Dutta, Satyajit ;
Ray, Supratim ;
Nagarajan, K. .
SAUDI PHARMACEUTICAL JOURNAL, 2013, 21 (04) :337-343