Genomic selection for producer-recorded health event data in US dairy cattle

被引:111
作者
Gaddis, K. L. Parker [1 ]
Cole, J. B. [2 ]
Clay, J. S. [3 ]
Maltecca, C. [1 ]
机构
[1] N Carolina State Univ, Dept Anim Sci, Raleigh, NC 27695 USA
[2] USDA ARS, Anim Improvement Programs Lab, Beltsville, MD 20705 USA
[3] Dairy Records Management Syst, Raleigh, NC 27603 USA
关键词
dairy cattle; health; genomic selection; SOMATIC-CELL SCORE; GENETIC-PARAMETERS; CLINICAL MASTITIS; FULL PEDIGREE; TRAITS; ANIMALS; PREDICTIONS; DISORDERS; DISEASES; RELIABILITIES;
D O I
10.3168/jds.2013-7543
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
Emphasizing increased profit through increased dairy cow production has revealed a negative relationship of production with fitness and health traits. Decreased cow health can affect herd profitability through increased rates of involuntary culling and decreased or lost milk sales. The development of genomic selection methodologies, with accompanying substantial gains in reliability for low-heritability traits, may dramatically improve the feasibility of genetic improvement of dairy cow health. Producer-recorded health information may provide a wealth of information for improvement of dairy cow health, thus improving profitability. The principal objective of this study was to use health data collected from on-farm computer systems in the United States to estimate variance components and heritability for health traits commonly experienced by dairy cows. A single-step analysis was conducted to estimate genomic variance components and heritabilities for health events, including cystic ovaries, displaced abomasum, ketosis, lameness, mastitis, metritis, and retained placenta. A blended H matrix was constructed for a threshold model with fixed effects of parity and year-season and random effects of herd-year and sire. The single-step genomic analysis produced heritability estimates that ranged from 0.02 (standard deviation = 0.005) for lameness to 0.36 (standard deviation = 0.08) for retained placenta. Significant genetic correlations were found between lameness and cystic ovaries, displaced abomasum and ketosis, displaced abomasum and metritis, and retained placenta and metritis. Sire reliabilities increased, on average, approximately 30% with the incorporation of genomic data. From the results of these analyses; it was concluded that genetic selection for health traits using producer-recorded data are feasible in the United States, and that the inclusion of genomic data substantially improves reliabilities for these traits.
引用
收藏
页码:3190 / 3199
页数:10
相关论文
共 54 条
[1]   Genetic basis and risk factors for infectious and noninfectious diseases in US Holsteins. I. Estimation of genetic parameters for single diseases and general health [J].
Abdel-Azim, GA ;
Freeman, AE ;
Kehrli, ME ;
Kelm, SC ;
Burton, JL ;
Kuck, AL ;
Schnell, S .
JOURNAL OF DAIRY SCIENCE, 2005, 88 (03) :1199-1207
[2]   Efficient computation of the genomic relationship matrix and other matrices used in single-step evaluation [J].
Aguilar, I. ;
Misztal, I. ;
Legarra, A. ;
Tsuruta, S. .
JOURNAL OF ANIMAL BREEDING AND GENETICS, 2011, 128 (06) :422-428
[3]   Hot topic: A unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score [J].
Aguilar, I. ;
Misztal, I. ;
Johnson, D. L. ;
Legarra, A. ;
Tsuruta, S. ;
Lawlor, T. J. .
JOURNAL OF DAIRY SCIENCE, 2010, 93 (02) :743-752
[4]   The cost of generic clinical mastitis in dairy cows as estimated by using dynamic programming [J].
Bar, D. ;
Tauer, L. W. ;
Bennett, G. ;
Gonzalez, R. N. ;
Hertl, J. A. ;
Schukken, Y. H. ;
Schulte, H. F. ;
Welcome, F. L. ;
Groehn, Y. T. .
JOURNAL OF DAIRY SCIENCE, 2008, 91 (06) :2205-2214
[5]   Reliabilities of genomic prediction using combined reference data of the Nordic Red dairy cattle populations [J].
Brondum, R. F. ;
Rius-Vilarrasa, E. ;
Stranden, I. ;
Su, G. ;
Guldbrandtsen, B. ;
Fikse, W. F. ;
Lund, M. S. .
JOURNAL OF DAIRY SCIENCE, 2011, 94 (09) :4700-4707
[6]   GENETIC ASPECTS OF BEEF PRODUCTION AMONG HOLSTEIN-FRIESIANS PEDIGREE SELECTED FOR MILK-PRODUCTION [J].
CALO, LL ;
MCDOWELL, RE ;
VANVLECK, LD ;
MILLER, PD .
JOURNAL OF ANIMAL SCIENCE, 1973, 37 (03) :676-682
[7]   Genetic parameters for clinical mastitis, somatic cell score, and production in the first three lactations of Swedish Holstein cows [J].
Carlén, E ;
Strandberg, E ;
Roth, A .
JOURNAL OF DAIRY SCIENCE, 2004, 87 (09) :3062-3070
[8]   The cost of different types of lameness in dairy cows calculated by dynamic programming [J].
Cha, E. ;
Hertl, J. A. ;
Bar, D. ;
Groehn, Y. T. .
PREVENTIVE VETERINARY MEDICINE, 2010, 97 (01) :1-8
[9]   Genomic prediction when some animals are not genotyped [J].
Christensen, Ole F. ;
Lund, Mogens S. .
GENETICS SELECTION EVOLUTION, 2010, 42
[10]  
Cole J. B., 2010, NM41209 AIPL USDA